RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 HOXB9P17482 250 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TACR2P21452 398 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 BTCP35070 178 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 BUD31P41223 144 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 STXBP1P61764 594 aaKnown RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 WDR5P61964 334 aaKnown RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TNFRSF17Q02223 184 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 LRRC37A5PQ49AS3 106 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 KRBOX4Q5JUW0 171 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MEDAGQ5VYS4 303 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 CD276Q5ZPR3 534 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 RPTNQ6XPR3 784 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TSPAN33Q86UF1 283 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 NKAIN4Q8IVV8 208 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 RBFAQ8N0V3 343 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 THEM5Q8N1Q8 247 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TEX26Q8N6G2 289 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SLC7A13Q8TCU3 470 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 XAGE5Q8WWM1 108 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 KIAA1143Q96AT1 154 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 ZC3HAV1LQ96H79 300 aaKnown RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 OR2M2Q96R28 347 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 FNDC11Q9BVV2 318 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SEMA4CQ9C0C4 833 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 NT5DC2Q9H857 520 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MED20Q9H944 212 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM138Q9NPI0 162 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SH3BGRL2Q9UJC5 107 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 ANGPT4Q9Y264 503 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MCM3APO60318 1980 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 OR2AG2A6NM03 316 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 DNASE2O00115 360 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 PGRMC2O15173 223 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 CXCL14O95715 111 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 LDOC1O95751 146 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 ECDO95905 644 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 HLA-DPB1P04440 258 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 C1SP09871 688 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 NPR2P20594 1047 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MAOBP27338 520 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 HOXD9P28356 352 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 AHRP35869 848 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SGSHP51688 502 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 BTG1P62324 171 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SPIN4Q56A73 249 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MPP7Q5T2T1 576 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 PODNL1Q6PEZ8 512 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TFAP2EQ6VUC0 442 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM86AQ8N2M4 240 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 HDDC3Q8N4P3 179 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 OXR1Q8N573 874 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 OR4K5Q8NGD3 323 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 KLK6Q92876 244 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 PPCDCQ96CD2 204 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 GPA33Q99795 319 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 QRSL1Q9H0R6 528 aaKnown RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 LDAHQ9H6V9 325 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 GKN1Q9NS71 199 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 WSB2Q9NYS7 404 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 NTMQ9P121 344 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 RBPJLQ9UBG7 517 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 RPS6KB2Q9UBS0 482 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SEC14L3Q9UDX4 400 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 FBXW2Q9UKT8 454 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 DISC1C4P0D8 188 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 SGK494L7N484 410 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 SLC28A2O43868 658 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 SSX5O60225 188 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF623O75123 536 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 KHDRBS3O75525 346 aaKnown RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 REM1O75628 298 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 RP2O75695 350 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 STATHP02808 62 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 RLN2P04090 185 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 LIMS3P0CW19 117 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 LIMS4P0CW20 117 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 HOXB6P17509 224 aaKnown RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 HK1P19367 917 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 CD22P20273 847 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 ELAVL4P26378 380 aaKnown RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 ADH7P40394 386 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 RECQLP46063 649 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 SLC6A11P48066 632 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 GIPRP48546 466 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 SSTP61278 116 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 GSG1Q2KHT4 349 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 CCSMST1Q4G0I0 132 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 PAN3Q58A45 887 aaKnown RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 PDSS1Q5T2R2 415 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 AADACL4Q5VUY2 407 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 TPGS2Q68CL5 300 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 OR7E24Q6IFN5 339 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 PGBD2Q6P3X8 592 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 NCEH1Q6PIU2 408 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 RRM2BQ7LG56 351 aa7.08□□□□□ -1.28
HDAC9-214ENST00000441542 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-214ENST00000441542 PDZD9Q8IXQ8 264 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms