RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FAIM2Q9BWQ8 316 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 A0A1W2PS29 197 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 FEZF1A0PJY2 475 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 FAM170BA6NMN3 283 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 STK25O00506 426 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 GMDSO60547 372 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 LPLP06858 475 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 ADRB1P08588 477 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 UCHL1P09936 223 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 HK1P19367 917 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 COL28A1Q2UY09 1125 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 CLLU1Q5K131 121 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 SLC27A4Q6P1M0 643 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 NHLRC1Q6VVB1 395 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 SLC36A4Q6YBV0 504 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 Q6ZVU0 165 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 HSD11B1LQ7Z5J1 315 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 AMER3Q8N944 861 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 OR2T4Q8NH00 348 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 ASZ1Q8WWH4 475 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 UROC1Q96N76 676 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 DMRTA2Q96SC8 542 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 RIOK2Q9BVS4 552 aaKnown RBP12.57□□□□□ -0.4
ACTN1-204ENST00000438964 CA10Q9NS85 328 aa12.57□□□□□ -0.4
ACTN1-204ENST00000438964 KIF26AQ9ULI4 1882 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-204ENST00000438964 A0A087WUU8 490 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 H3BSH0 61 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF593O00488 134 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 SRPRAP08240 638 aaKnown RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 C8orf89P0DMQ9 161 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 KCNC3Q14003 757 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 TCTE1Q5JU00 501 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 GET4Q7L5D6 327 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 FBXO15Q8NCQ5 510 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OR51I1Q9H343 314 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 DMRT3Q9NQL9 472 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 GPR55Q9Y2T6 319 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 PLXNA3P51805 1871 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 SCN3AQ9NY46 2000 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 SLC22A23A1A5C7 686 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 G3V3Q6 166 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 FZD7O75084 574 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 H2AFB2P0C5Z0 115 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 LCN1P31025 176 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 HCCSP53701 268 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 AP1S2P56377 157 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CLDN2P57739 230 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ERVK-21P61565 698 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 GPR17Q13304 367 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 FAM71E1Q6IPT2 247 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 KIAA1841Q6NSI8 718 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CPOQ8IVL8 374 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OR10H4Q8NGA5 316 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 BCL7CQ8WUZ0 217 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 PDXPQ96GD0 296 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 COPS3Q9UNS2 423 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 hCG_1807616A0A1W2PRN6 198 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 TMEM129A0AVI4 362 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CHST10O43529 356 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 EPPINO95925 133 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CBX7O95931 251 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CXCL2P19875 107 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 FGF9P31371 208 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 RAB40BQ12829 278 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 LMAN2Q12907 356 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OPCMLQ14982 345 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 SLC25A25Q6KCM7 469 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 PLBD1Q6P4A8 553 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 C17orf47Q8NEP4 570 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 OR5M3Q8NGP4 307 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 SLC16A10Q8TF71 515 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ALG14Q96F25 216 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 TEFMQ96QE5 360 aaKnown RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ELAC1Q9H777 363 aaKnown RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 CUEDC1Q9NWM3 386 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-204ENST00000438964 KCNE3Q9Y6H6 103 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 KNL1Q8NG31 2342 aa12.56□□□□□ -0.4
ACTN1-204ENST00000438964 ZNF197O14709 1029 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 GYPBP06028 91 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 ASGR1P07306 291 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 NPPBP16860 134 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 HOXC8P31273 242 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 ACSL1P33121 698 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 MAGEB1P43366 347 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 KCNJ5P48544 419 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 SLC11A1P49279 550 aa12.55□□□□□ -0.4
ACTN1-204ENST00000438964 GBX2P52951 348 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-204ENST00000438964 TAP2Q03519 686 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms