RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RHBDL3P58872 404 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 DAOAP59103 153 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 SYNPRQ8TBG9 265 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 MARC2Q969Z3 335 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 SEC22CQ9BRL7 303 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 TESQ9UGI8 421 aaKnown RBP10.98□□□□□ -0.65
PTCH1-209ENST00000437951 PCDHGA7Q9Y5G6 932 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 hCG_1807616A0A1W2PRN6 198 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 CBY3A6NI87 242 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 GJE1A6NN92 205 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 AGPAT2O15120 278 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 SIX3O95343 332 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-209ENST00000437951 JUNDP17535 347 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 ELK1P19419 428 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 RAB5AP20339 215 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 LAP3P28838 519 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 RAB1AP62820 205 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 LPCAT3Q6P1A2 487 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 HORMAD2Q8N7B1 307 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 OR5D16Q8NGK9 328 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 GIMAP1Q8WWP7 306 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 SLAMF9Q96A28 289 aa10.98□□□□□ -0.65
PTCH1-209ENST00000437951 CXorf49A8MYA2 514 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PPT1P50897 306 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 OPCMLQ14982 345 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 LINGO4Q6UY18 593 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ADGRA1Q86SQ6 560 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 OR9I1Q8NGQ6 314 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PCDHGC4Q9Y5F7 938 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 TTC24A2A3L6 582 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 A8MVM7 634 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 IL33O95760 270 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 HLA-DQB2P05538 268 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 RPS13P62277 151 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 GPR148Q8TDV2 347 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 NLE1Q9NVX2 485 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ZMAT5Q9UDW3 170 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF230Q9UIE0 474 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 SALL4Q9UJQ4 1053 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PRELID3BQ9Y3B1 194 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PCDHA2Q9Y5H9 948 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ARHGEF28Q8N1W1 1705 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 NUPL2O15504 423 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 LAG3P18627 525 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 MAKP20794 623 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PER3P56645 1201 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PAFAH1B3Q15102 231 aaKnown RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 CYS1Q717R9 158 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 RHOXF1Q8NHV9 184 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 IFT22Q9H7X7 185 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 GALPQ9UBC7 116 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 AHSGP02765 367 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 TMPPEQ6ZT21 453 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 RADILQ96JH8 1075 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 TMPRSS5Q9H3S3 457 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PREX1Q8TCU6 1659 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 EIF3FO00303 357 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 MSTNO14793 375 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 SLC43A1O75387 559 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 EPHX1P07099 455 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ADRB1P08588 477 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 CD300LGQ6UXG3 332 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 GDPD4Q6W3E5 623 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 KATNB1Q9BVA0 655 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 MCOLN1Q9GZU1 580 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 PPP1R14DQ9NXH3 145 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 UGT2A1Q9Y4X1 527 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 TP53I11O14683 189 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 CFIP05156 583 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 BMP1P13497 986 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 LBHQ53QV2 105 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 DCAF12L1Q5VU92 463 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 NCBP2-AS2Q69YL0 99 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 LARP4Q71RC2 724 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTCH1-209ENST00000437951 C4orf32Q8N8J7 132 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 KCNK13Q9HB14 408 aa10.97□□□□□ -0.65
PTCH1-209ENST00000437951 ALX3O95076 343 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 TNFP01375 233 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 ARSBP15848 533 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 H3F3AP84243 136 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 UBXN2BQ14CS0 331 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 C15orf52Q6ZUT6 534 aaKnown RBP10.96□□□□□ -0.65
PTCH1-209ENST00000437951 TAC4Q86UU9 113 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 C17orf62Q9BQA9 187 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 CRB3Q9BUF7 120 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 LYRM2Q9NU23 88 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-209ENST00000437951 MRPL15Q9P015 296 aaKnown RBP10.96□□□□□ -0.65
PTCH1-209ENST00000437951 YARS2Q9Y2Z4 477 aaKnown RBP10.96□□□□□ -0.65
PTCH1-209ENST00000437951 YTHDF2Q9Y5A9 579 aaKnown RBP10.96□□□□□ -0.65
PTCH1-209ENST00000437951 NID2Q14112 1375 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 CPED1A4D0V7 1026 aa10.96□□□□□ -0.65
PTCH1-209ENST00000437951 CNOT4O95628 575 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms