RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TAGAPQ8N103 731 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 B4GALNT2Q8NHY0 566 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 COG8Q96MW5 612 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 PTCHD1Q96NR3 888 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 ING2Q9H160 280 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 LRRN3Q9H3W5 708 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 ENAMQ9NRM1 1142 aa19.64■□□□□ 0.74
PTPRF-207ENST00000436724 IGHV5-10-1A0A0J9YXX1 117 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 BLACEA4D250 179 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 CER1O95813 267 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 MSL3P1P0C860 447 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 ITGAMP11215 1152 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 IL7RP16871 459 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 EFNA3P52797 238 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 HOXC5Q00444 222 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 PSG6Q00889 435 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 SEC23BQ15437 767 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 NEDD8Q15843 81 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 MINDY4Q4G0A6 757 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 VWA2Q5GFL6 755 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 Q6ZPB1 254 aaPredicted RBP19.64■□□□□ 0.73
PTPRF-207ENST00000436724 DPYSL5Q9BPU6 564 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 DCUN1D5Q9BTE7 237 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 ERVK-19Q9WJR5 959 aa19.64■□□□□ 0.73
PTPRF-207ENST00000436724 RFX3P48380 749 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 SQSTM1Q13501 440 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ANGPT1Q15389 498 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 MAPK14Q16539 360 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 MEP1AQ16819 746 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 CTU2Q2VPK5 515 aaKnown RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 PRSS58Q8IYP2 241 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 OR4N2Q8NGD1 307 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 IFI44Q8TCB0 444 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 TSLPQ969D9 159 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 GTPBP3Q969Y2 492 aaKnown RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 MVB12AQ96EY5 273 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 STACQ99469 402 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ZNF350Q9GZX5 532 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 MTHFD2LQ9H903 347 aaPredicted RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 AASSQ9UDR5 926 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ACAD8Q9UKU7 415 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 TRIM64BA6NI03 449 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 CCNB2O95067 398 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 JUNBP17275 347 aaPredicted RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ELAVL4P26378 380 aaKnown RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 MAPK10P53779 464 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 CD47Q08722 323 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 NPRL3Q12980 569 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ZNF691Q5VV52 312 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ZCCHC12Q6PEW1 402 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ZAR1Q86SH2 424 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 LSRQ86X29 649 aaPredicted RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 CHDHQ8NE62 594 aaPredicted RBP19.63■□□□□ 0.73
PTPRF-207ENST00000436724 TUBA1CQ9BQE3 449 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 FOLH1BQ9HBA9 442 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 ZNF304Q9HCX3 659 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 KCNE5Q9UJ90 142 aa19.63■□□□□ 0.73
PTPRF-207ENST00000436724 PEX12O00623 359 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 TOX3O15405 576 aaPredicted RBP19.62■□□□□ 0.73
PTPRF-207ENST00000436724 COQ9O75208 318 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 H1F0P07305 194 aaKnown RBP19.62■□□□□ 0.73
PTPRF-207ENST00000436724 CRHBPP24387 322 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 GSSP48637 474 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 ISL1P61371 349 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 DAB2P98082 770 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 NNATQ16517 81 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 AQP11Q8NBQ7 271 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 OR4D9Q8NGE8 314 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 NAT6Q93015 286 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 CNDP2Q96KP4 475 aaKnown RBP19.62■□□□□ 0.73
PTPRF-207ENST00000436724 OR6C1Q96RD1 312 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 ZNF443Q9Y2A4 671 aaPredicted RBP19.62■□□□□ 0.73
PTPRF-207ENST00000436724 HCN4Q9Y3Q4 1203 aa19.62■□□□□ 0.73
PTPRF-207ENST00000436724 A0A1B0GX78 115 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 DSCR3O14972 297 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 STX11O75558 287 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 TIAF1O95411 115 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 GASTP01350 101 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 IFI6P09912 130 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 EEF1B2P24534 225 aaKnown RBP19.61■□□□□ 0.73
PTPRF-207ENST00000436724 FOXL2P58012 376 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 DSG2Q14126 1118 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 RBM48Q5RL73 367 aaKnown RBP19.61■□□□□ 0.73
PTPRF-207ENST00000436724 ZNF770Q6IQ21 691 aaPredicted RBP19.61■□□□□ 0.73
PTPRF-207ENST00000436724 OR13F1Q8NGS4 319 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 SLC7A13Q8TCU3 470 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 SGCDQ92629 289 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 DHRS1Q96LJ7 313 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 CCDC74BQ96LY2 380 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 ARRDC1-AS1Q9H2J1 176 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 FANCEQ9HB96 536 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 SATB2Q9UPW6 733 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 A8MUA0 341 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 PRKNO60260 465 aaPredicted RBP19.61■□□□□ 0.73
PTPRF-207ENST00000436724 UGT2B11O75310 529 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 UGT2B17O75795 530 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 NKX2-2O95096 273 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 ANXA8P13928 327 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 TNNI3P19429 210 aa19.61■□□□□ 0.73
PTPRF-207ENST00000436724 FBLP22087 321 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms