RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	LHX9	Q9NQ69	397 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ARMC1	Q9NVT9	282 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	VPS29	Q9UBQ0	182 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZDHHC2	Q9UIJ5	367 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	WASF3	Q9UPY6	502 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PADI2	Q9Y2J8	665 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SF3B6	Q9Y3B4	125 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MAU2	Q9Y6X3	613 aa		5.79	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A0G2JN53	185 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A1B0GTL3	188 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LOC390937	A0A1W2PQ73	354 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF860	A6NHJ4	632 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRPC5OS	A6NMA1	111 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	C21orf140	B9A014	251 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638		H3BMH7	237 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SGK494	L7N484	410 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DVL2	O14641	736 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FOXS1	O43638	330 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GALR3	O60755	368 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RDH16	O75452	317 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RSL1D1	O76021	490 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BMP10	O95393	424 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LINC00032	P0C843	101 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	APEH	P13798	732 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ITGAX	P20702	1163 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CPN2	P22792	545 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ADSL	P30566	484 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	IFNA8	P32881	189 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RORA	P35398	523 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DLST	P36957	453 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MDH1	P40925	334 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TSFM	P43897	325 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CAMLG	P49069	296 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HTR6	P50406	440 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF41	P51814	821 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PPP5C	P53041	499 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FOXA1	P55317	472 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RAC3	P60763	192 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HMGCS1	Q01581	520 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LIPE	Q05469	1076 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ACSM2A	Q08AH3	577 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TBL3	Q12788	808 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF267	Q14586	743 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ABRAXAS2	Q15018	415 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SGCA	Q16586	387 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TST	Q16762	297 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NKAIN1	Q4KMZ8	207 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ATP6AP1L	Q52LC2	224 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SPIN4	Q56A73	249 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAM209B	Q5JX69	171 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CCNYL2	Q5T2Q4	361 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BROX	Q5VW32	411 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ACSM2B	Q68CK6	577 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ADNP2	Q6IQ32	1131 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ABHD17C	Q6PCB6	329 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	UNQ6494/PRO21346	Q6UXR6	183 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OVCH1	Q7RTY7	1134 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KRTAP19-1	Q8IUB9	90 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RNF175	Q8N4F7	328 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR6Y1	Q8NGX8	325 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ANGPTL6	Q8NI99	470 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CT55	Q8WUE5	264 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CHTF18	Q8WVB6	975 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	WDR60	Q8WVS4	1066 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FKBP10	Q96AY3	582 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF764	Q96H86	408 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PPP3R2	Q96LZ3	170 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NSMCE2	Q96MF7	247 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SORT1	Q99523	831 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DHRS9	Q9BPW9	319 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SORBS1	Q9BX66	1292 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NPL	Q9BXD5	320 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CHST8	Q9H2A9	424 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KLHL31	Q9H511	634 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRIM45	Q9H8W5	580 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GPN2	Q9H9Y4	310 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LRTM1	Q9HBL6	345 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TREM1	Q9NP99	234 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	INIP	Q9NRY2	104 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	C14orf105	Q9NVL8	296 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LYAR	Q9NX58	379 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ERVK13-1	Q9NX77	482 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HCN3	Q9P1Z3	774 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRPC4	Q9UBN4	977 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF282	Q9UDV7	671 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MARCO	Q9UEW3	520 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PHF11	Q9UIL8	331 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF225	Q9UK10	706 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KCND3	Q9UK17	655 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NXT1	Q9UKK6	140 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ACSL6	Q9UKU0	697 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MRPS33	Q9Y291	106 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MRPS2	Q9Y399	296 aa	Known RBP	5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DNAJC15	Q9Y5T4	150 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PTPRB	P23467	1997 aa		5.78	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TEX51	A0A1B0GUA7	166 aa		5.77	□□□□□ -1.49

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