RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ACTR3P61158 418 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 RPS18P62269 152 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 PSG6Q00889 435 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 BNIP2Q12982 314 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 VEZF1Q14119 521 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 MYBPC3Q14896 1274 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 RTP5Q14D33 572 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 TESK1Q15569 626 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DUSP5Q16690 384 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CYP51A1Q16850 503 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 C1orf146Q5VVC0 180 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 GLYATQ6IB77 296 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CDC73Q6P1J9 531 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ERICH5Q6P6B1 374 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ZCCHC12Q6PEW1 402 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 CPEB2Q7Z5Q1 589 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DHFR2Q86XF0 187 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DTX1Q86Y01 620 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 KIF18BQ86Y91 864 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SPPL2CQ8IUH8 684 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 LGI4Q8N135 537 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ANKFN1Q8N957 763 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 MORN4Q8NDC4 146 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 BHLHE22Q8NFJ8 381 aaPredicted RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 OR14A16Q8NHC5 309 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 C16orf52Q8NHV5 167 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 NFKBIDQ8NI38 313 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 FBXO30Q8TB52 745 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC2A12Q8TD20 617 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC38A5Q8WUX1 472 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 XAGE5Q8WWM1 108 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 METTL21AQ8WXB1 218 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DAZLQ92904 295 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 C8orf44Q96CB5 159 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 VSTM2LQ96N03 204 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 OR7D2Q96RA2 312 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 UBL7Q96S82 380 aaPredicted RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 LMF2Q9BU23 707 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 OR8D2Q9GZM6 311 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 FOLH1BQ9HBA9 442 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ACTR3BQ9P1U1 418 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 BCAP29Q9UHQ4 241 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNF223Q9UK11 482 aaPredicted RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 TCFL5Q9UL49 500 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 FAF1Q9UNN5 650 aaPredicted RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 PPIEQ9UNP9 301 aaKnown RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 WASF3Q9UPY6 502 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 DTX4Q9Y2E6 619 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 HEMK1Q9Y5R4 338 aaPredicted RBP6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 SNX13Q9Y5W8 968 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 HS3ST3B1Q9Y662 390 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 MUC6Q6W4X9 2439 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 RP1P56715 2156 aa6.52□□□□□ -1.37
LSM3P3-201ENST00000436601 HEATR5BQ9P2D3 2071 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 IGHV1-45A0A0A0MS14 117 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 A0A1W2PQ72 361 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 TCRBV5S2A0A599 114 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 GXYLT2A0PJZ3 443 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 TRABD2BA6NFA1 517 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 SAGE2PA6NJ88 616 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 A8MVJ9 347 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 C21orf140B9A014 251 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CXCR6O00574 342 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 SOCS6O14544 535 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 GSTA4O15217 222 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 ASNA1O43681 348 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 PRKNO60260 465 aaPredicted RBP6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 PRAMEF2O60811 474 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 COQ9O75208 318 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CREG1O75629 220 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 SEC24DO94855 1032 aaPredicted RBP6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 NKX2-2O95096 273 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 IGHEP01854 428 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 BCHEP06276 602 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 ALOX5P09917 674 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CT45A8P0DMV1 189 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CT45A9P0DMV2 189 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 MMP11P24347 488 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CD82P27701 267 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 NOS3P29474 1203 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 KDELR2P33947 212 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 GABRA3P34903 492 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 DLSTP36957 453 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 RPS15P62841 145 aaKnown RBP6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 TXNL4AP83876 142 aaKnown RBP6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CDK6Q00534 326 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 RBBP4Q09028 425 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 FUT5Q11128 374 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 DNASE1L3Q13609 305 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 SCARB2Q14108 478 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 FLOT2Q14254 428 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 PCOLCEQ15113 449 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 TGIF1Q15583 401 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 SYPL1Q16563 259 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNF630Q2M218 657 aaPredicted RBP6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 CT45A2Q5DJT8 189 aa6.51□□□□□ -1.37
LSM3P3-201ENST00000436601 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms