RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SLC30A2Q9BRI3 323 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 ADGRL4Q9HBW9 690 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 AGPAT5Q9NUQ2 364 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 CRLS1Q9UJA2 301 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 B9D1Q9UPM9 204 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 KLF2Q9Y5W3 355 aaPredicted RBP4.85□□□□□ -1.63
USP54-206ENST00000433394 SPACA6W5XKT8 324 aa4.85□□□□□ -1.63
USP54-206ENST00000433394 TCF20Q9UGU0 1960 aaKnown RBP4.85□□□□□ -1.63
USP54-206ENST00000433394 E9PQ18 207 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 IMPA2O14732 288 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 LRRTM2O43300 516 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 PPIHO43447 177 aaKnown RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 SH3BGRLO75368 114 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 UGT2B4P06133 528 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 BCKDHAP12694 445 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 RPA2P15927 270 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 NTHL1P78549 312 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 HMGN5P82970 282 aaKnown RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 ZIC1Q15915 447 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 MRGPRG-AS1Q2M3A8 158 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 DCST2Q5T1A1 773 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 C9orf66Q5T8R8 295 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 TMEM184AQ6ZMB5 413 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 ZDHHC21Q8IVQ6 265 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 ABHD12Q8N2K0 398 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 ZSCAN4Q8NAM6 433 aaPredicted RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 IPMKQ8NFU5 416 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 TBCKQ8TEA7 893 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 RLN3Q8WXF3 142 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 RASL10AQ92737 203 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 MYLPFQ96A32 169 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 ZNF689Q96CS4 500 aaPredicted RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 WBP1Q96G27 269 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 C9orf85Q96MD7 179 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 TRIM6Q9C030 488 aaPredicted RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 COMMD4Q9H0A8 199 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 TMEM117Q9H0C3 514 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 TIGARQ9NQ88 270 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 MLXQ9UH92 298 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 BARX2Q9UMQ3 279 aaPredicted RBP4.84□□□□□ -1.63
USP54-206ENST00000433394 MAD1L1Q9Y6D9 718 aa4.84□□□□□ -1.63
USP54-206ENST00000433394 KIF21BO75037 1637 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 URB2Q14146 1524 aaKnown RBP4.83□□□□□ -1.64
USP54-206ENST00000433394 ERICH3Q5RHP9 1530 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 POLA1P09884 1462 aaPredicted RBP4.83□□□□□ -1.64
USP54-206ENST00000433394 IFT140Q96RY7 1462 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 PARD3Q8TEW0 1356 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 LCMT2O60294 686 aaKnown RBP4.83□□□□□ -1.64
USP54-206ENST00000433394 TPST2O60704 377 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 MBD3O95983 291 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 PVRP15151 417 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 SDC1P18827 310 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 GNPDA1P46926 289 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ACADVLP49748 655 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ZNF85Q03923 595 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ABRAXAS2Q15018 415 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 PCK2Q16822 640 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 FAM219BQ5XKK7 198 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 PAQR6Q6TCH4 344 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 RGS9BPQ6ZS82 235 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 TMEM17Q86X19 198 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ZNF440Q8IYI8 595 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 CRYGNQ8WXF5 182 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 RAB3CQ96E17 227 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 SENP8Q96LD8 212 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ZNF599Q96NL3 588 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ERP44Q9BS26 406 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 TTYH2Q9BSA4 534 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 TEX13BQ9BXU2 312 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 KRTAP1-5Q9BYS1 174 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 POLR1EQ9GZS1 481 aaKnown RBP4.83□□□□□ -1.64
USP54-206ENST00000433394 RAB33BQ9H082 229 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 NT5C3AQ9H0P0 336 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 RNF24Q9Y225 148 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 IKBKGQ9Y6K9 419 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 CUL7Q14999 1698 aa4.83□□□□□ -1.64
USP54-206ENST00000433394 THOC2Q8NI27 1593 aaKnown RBP4.82□□□□□ -1.64
USP54-206ENST00000433394 SOGA1O94964 1423 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 IGHV3OR16-12A0A075B7B8 117 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 SYNJ2BP-COX16A0A087WUM0 186 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 C15orf38-AP3S2A0A0A6YYH1 394 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 ZNF487B1APH4 448 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 SDHDO14521 159 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 ADCY5O95622 1261 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 HCKP08631 526 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 CD300CQ08708 224 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 MAPK6Q16659 721 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 MICAQ29983 383 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 MS4A13Q5J8X5 152 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 HACD2Q6Y1H2 254 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 DPY19L4Q7Z388 723 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 SLC25A42Q86VD7 318 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 OR4Q3Q8NH05 313 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 TFB1MQ8WVM0 346 aaKnown RBP4.82□□□□□ -1.64
USP54-206ENST00000433394 TOMM40LQ969M1 308 aa4.82□□□□□ -1.64
USP54-206ENST00000433394 DNAJA3Q96EY1 480 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms