RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 LRR1Q96L50 414 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 AMDHD1Q96NU7 426 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 IL17FQ96PD4 163 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DEPDC7Q96QD5 511 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 BBS4Q96RK4 519 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 BTBD1Q9H0C5 482 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 GLIPR2Q9H4G4 154 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 CACYBPQ9HB71 228 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SLAMF7Q9NQ25 335 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SLC2A4RGQ9NR83 387 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ZCCHC3Q9NUD5 404 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DDX28Q9NUL7 540 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DZANK1Q9NVP4 752 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 C14orf119Q9NWQ9 140 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 HCFC1R1Q9NWW0 138 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ASB6Q9NWX5 421 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 KLHL28Q9NXS3 571 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TRPC4Q9UBN4 977 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 KLF15Q9UIH9 416 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 CAB39Q9Y376 341 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 PCDHGB7Q9Y5F8 929 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 HELZP42694 1942 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 A0A1W2PQL4 384 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 DUXAA6NLW8 204 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 POLR1CO15160 346 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 EMC8O43402 210 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 OR1F1O43749 312 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 TMPRSS11DO60235 418 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SLC19A2O60779 497 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 TMCC2O75069 709 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 CYP7B1O75881 506 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 NFATC1O95644 943 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 HLA-DQB1P01920 261 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 HLA-DPB1P04440 258 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 EPHX1P07099 455 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PRKAR1AP10644 381 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 CSNK2A2P19784 350 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 MAGP20916 626 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 CPN2P22792 545 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 AHRP35869 848 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SSR2P43308 183 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 MTNR1AP48039 350 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RFX2P48378 723 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 NCBP2P52298 156 aaKnown RBP eCLIP8.16□□□□□ -1.13e-6■■■■□ 22.2
GABPB1-205ENST00000429662 RAB25P57735 213 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 CSNK1G2P78368 415 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 MRPS15P82914 257 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 IFITM2Q01629 132 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PRDX1Q06830 199 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PIN1Q13526 163 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 HTR4Q13639 388 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 AGERQ15109 404 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 CDK10Q15131 360 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 QPRTQ15274 297 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SF3B4Q15427 424 aaKnown RBP eCLIP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 TAB1Q15750 504 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ZIC1Q15915 447 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF79Q15937 498 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SYPL1Q16563 259 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF628Q5EBL2 1059 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 NDUFAF5Q5TEU4 345 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 TSSK4Q6SA08 328 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 UNQ6494/PRO21346Q6UXR6 183 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF730Q6ZMV8 503 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RRM2BQ7LG56 351 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 IQCHQ86VS3 1027 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 LIX1LQ8IVB5 337 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SAMD14Q8IZD0 417 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 MMP21Q8N119 569 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PSD4Q8NDX1 1056 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 C19orf18Q8NEA5 215 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 OR4D11Q8NGI4 311 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 OR52N1Q8NH53 320 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PIGXQ8TBF5 258 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 C1GALT1C1Q96EU7 318 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SLC6A18Q96N87 628 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ARHGDIGQ99819 225 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 DPH7Q9BTV6 452 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RPP25Q9BUL9 199 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SARGQ9BW04 601 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SORBS1Q9BX66 1292 aaKnown RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 SAP130Q9H0E3 1048 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 MVB12BQ9H7P6 319 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 EVA1AQ9H8M9 152 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RMI1Q9H9A7 625 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ABCB9Q9NP78 766 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 LHX9Q9NQ69 397 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 RXFP3Q9NSD7 469 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
GABPB1-205ENST00000429662 KLHL21Q9UJP4 597 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 FBXW2Q9UKT8 454 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 ENTPD4Q9Y227 616 aa8.16□□□□□ -1.1
GABPB1-205ENST00000429662 POLHQ9Y253 713 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms