RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 SFXN2Q96NB2 322 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 TSSK3Q96PN8 268 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 FAM111AQ96PZ2 611 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 TRMOQ9BU70 441 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 MECRQ9BV79 373 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 DSN1Q9H410 356 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 MKS1Q9NXB0 559 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 PPP4R1LQ9P1A2 415 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 SLC17A7Q9P2U7 560 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 MRPS18CQ9Y3D5 142 aaKnown RBP17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 DNAJC15Q9Y5T4 150 aa17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 HRNRQ86YZ3 2850 aaPredicted RBP17.31■□□□□ 0.36
AL954642.1-201ENST00000428088 TMEM233B4DJY2 109 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 PDPK1O15530 556 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 FADS1O60427 444 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 ZIC3O60481 467 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 SPAG7O75391 227 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 CHRNGP07510 517 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 SDC1P18827 310 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 OPRM1P35372 400 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 RFX3P48380 749 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 DGKQP52824 942 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 RPL38P63173 70 aaKnown RBP17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 FOXF2Q12947 444 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 HSPB3Q12988 150 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 TESK1Q15569 626 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 ZNHIT3Q15649 155 aaPredicted RBP17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 FBXL19-AS1Q494R0 122 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 ZNF385BQ569K4 471 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 KANK2Q63ZY3 851 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 CLHC1Q8NHS4 586 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 DTNBP1Q96EV8 351 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 FCRL1Q96LA6 429 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 G6PC3Q9BUM1 346 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 Q9N2J8 555 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 EQTNQ9NQ60 294 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 DNAJB12Q9NXW2 375 aaKnown RBP17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 BAIAP2L1Q9UHR4 511 aa17.3■□□□□ 0.36
AL954642.1-201ENST00000428088 CLCA1A8K7I4 914 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 EEF1E1-BLOC1S5C9J1V9 151 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 EEF1E1O43324 174 aaKnown RBP17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 CTAG2O75638 210 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 CHEK2O96017 543 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 NUDT17P0C025 328 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 TMIGD3P0DMS9 266 aaPredicted RBP17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 NEFHP12036 1026 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 GABRA3P34903 492 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 GPC1P35052 558 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 DSCR4P56555 118 aaPredicted RBP17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 CLDN18P56856 261 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 STX5Q13190 355 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 GALNTL6Q49A17 601 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 DDIASQ8IXT1 998 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 RIBC1Q8N443 379 aaPredicted RBP17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 FADS6Q8N9I5 356 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 CCT7Q99832 543 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 RTN4RQ9BZR6 473 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 REEP4Q9H6H4 257 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 MED11Q9P086 117 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 SH3BP4Q9P0V3 963 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 TRAF6Q9Y4K3 522 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 MED13LQ71F56 2210 aa17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 MAP1AP78559 2803 aaPredicted RBP17.29■□□□□ 0.36
AL954642.1-201ENST00000428088 GXYLT2A0PJZ3 443 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 LSM1O15116 133 aaKnown RBP17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 NPHS1O60500 1241 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 IL33O95760 270 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 IL18BPO95998 194 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 FGF4P08620 206 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 CHMP24386 653 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 PEX19P40855 299 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 PRKAG1P54619 331 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 B3GALT5-AS1P59052 145 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 FLYWCH1Q4VC44 716 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 ARL13AQ5H913 290 aaPredicted RBP17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 ZCCHC23Q6ZST2 131 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 ADGRE4PQ86SQ3 457 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 OR2M3Q8NG83 312 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 TCP10LQ8TDR4 215 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 TWIST2Q8WVJ9 160 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 PPCDCQ96CD2 204 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 UCN2Q96RP3 112 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 GPATCH1Q9BRR8 931 aaKnown RBP17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 SDHAF3Q9NRP4 125 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 CLCF1Q9UBD9 225 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 LGALS13Q9UHV8 139 aa17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 FOXD3Q9UJU5 478 aaPredicted RBP17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 MRTO4Q9UKD2 239 aaKnown RBP17.28■□□□□ 0.36
AL954642.1-201ENST00000428088 PIP5K1BO14986 540 aa17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 RCBTB2O95199 551 aa17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 PRPS2P11908 318 aa17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 ZNF708P17019 499 aa17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 DNAJA1P31689 397 aaKnown RBP17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 MANFP55145 182 aaKnown RBP17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 UGT3A2Q3SY77 523 aa17.27■□□□□ 0.36
AL954642.1-201ENST00000428088 MARCH3Q86UD3 253 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms