RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CLDN15P56746 228 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RPS4XP62701 263 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ACSM2AQ08AH3 577 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CSTF3Q12996 717 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SPIN4Q56A73 249 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ACSM2BQ68CK6 577 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ANKRD34AQ69YU3 496 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DESI1Q6ICB0 168 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF474Q6S9Z5 364 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF550Q7Z398 422 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 WDR75Q8IWA0 830 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CIARTQ8N365 385 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 C1orf52Q8N6N3 182 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR6K3Q8NGY3 331 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DUSP19Q8WTR2 217 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 KAT2AQ92830 837 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EXOSC8Q96B26 276 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EFHD2Q96C19 240 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CNRIP1Q96F85 164 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MDFIQ99750 246 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MRPL57Q9BQC6 102 aaKnown RBP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR10A4Q9H209 315 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RNF122Q9H9V4 155 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FOLH1BQ9HBA9 442 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MIEF1Q9NQG6 463 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SLC35C2Q9NQQ7 365 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PCTPQ9UKL6 214 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GPR52Q9Y2T5 361 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF337Q9Y3M9 751 aa11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 NIPBLQ6KC79 2804 aaeCLIP11.06□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ANKHD1Q8IWZ3 2542 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ARHGAP21Q5T5U3 1957 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 A0A1W2PPR1 153 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RAD51CO43502 376 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DLX3O60479 287 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PLOD3O60568 738 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SUPT7LO94864 414 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 KCNH1O95259 989 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CT45A8P0DMV1 189 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CT45A9P0DMV2 189 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HPGDP15428 266 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EVI2BP34910 448 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DMTNQ08495 405 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF155Q12901 538 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 VEZF1Q14119 521 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 RASA2Q15283 850 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 LTB4RQ15722 352 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 VPS26BQ4G0F5 336 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CT45A2Q5DJT8 189 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PLXDC2Q6UX71 529 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 STEAP2Q8NFT2 490 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 METTL6Q8TCB7 284 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FBXO25Q8TCJ0 367 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FIG4Q92562 907 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GMPPAQ96IJ6 420 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 G6PC3Q9BUM1 346 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ESRP2Q9H6T0 727 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TIGARQ9NQ88 270 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MED11Q9P086 117 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GRID1Q9ULK0 1009 aa11.05□□□□□ -0.64
HLA-DQB3-203ENST00000425319 NINQ8N4C6 2090 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 A0A087WZY1 265 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR2M5A3KFT3 312 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EIF1AYO14602 144 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TLX2O43763 284 aaPredicted RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PCDH7O60245 1069 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 PAX1P15863 534 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 IL11P20809 199 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 NTSP30990 170 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CASQ1P31415 396 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 EIF1AXP47813 144 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CORO7P57737 925 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 MRPS25P82663 173 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CLCQ05315 142 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TRAF3Q13114 568 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 STX5Q13190 355 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CLEC12BQ2HXU8 276 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF628Q5EBL2 1059 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 SPDYAQ5MJ70 313 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HEPHL1Q6MZM0 1159 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 HMBOX1Q6NT76 420 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 WFDC8Q8IUA0 241 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 CNPY4Q8N129 248 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR2M3Q8NG83 312 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 OR9A2Q8NGT5 310 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 FNDC9Q8TBE3 224 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 TMEM158Q8WZ71 300 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 VSTM2LQ96N03 204 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ZNF681Q96N22 645 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 ALG2Q9H553 416 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 GRHL1Q9NZI5 618 aa11.04□□□□□ -0.64
HLA-DQB3-203ENST00000425319 XPR1Q9UBH6 696 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms