RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 MEF2DQ14814 521 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 OR7A5Q15622 319 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 GSG1Q2KHT4 349 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 PLA1AQ53H76 456 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 RPL13AP3Q6NVV1 102 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 LPCAT3Q6P1A2 487 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 IL27RAQ6UWB1 636 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 BAIAP2L2Q6UXY1 529 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 MSANTD1Q6ZTZ1 278 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 NDUFAF7Q7L592 441 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 SYT9Q86SS6 491 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 MEX3DQ86XN8 651 aaKnown RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 GPR26Q8NDV2 337 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 ZNF548Q8NEK5 533 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 OR5M9Q8NGP3 310 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 RGP1Q92546 391 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 ZNF845Q96IR2 970 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 C7orf34Q96L11 122 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 PPP3R2Q96LZ3 170 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 PITX2Q99697 317 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 PARP12Q9H0J9 701 aaKnown RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 MTG2Q9H4K7 406 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 CBLN4Q9NTU7 201 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 PRMT7Q9NVM4 692 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 ZNF226Q9NYT6 803 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 ING1Q9UK53 422 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-205ENST00000423368 FBXL3Q9UKT7 428 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 FAM50BQ9Y247 325 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 SPTBP11277 2137 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 A0A1B0GUL6 1792 aa6.47□□□□□ -1.37
CNOT4-205ENST00000423368 BCORQ6W2J9 1755 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 NUDT19A8MXV4 375 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 ST6GAL1P15907 406 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 CELP19835 753 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 MAPK3P27361 379 aaPredicted RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SOX18P35713 384 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 GATMP50440 423 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SEC61A1P61619 476 aaKnown RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 HMGCS1Q01581 520 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SNTB2Q13425 540 aaKnown RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 KIAA0141Q14154 515 aaPredicted RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 TKFCQ3LXA3 575 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SYTL3Q4VX76 610 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 FAM27D1Q5T7N8 215 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 WDR88Q6ZMY6 472 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 WDR53Q7Z5U6 358 aaPredicted RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 LHFPL3Q86UP9 236 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 MARCH9Q86YJ5 346 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 GPSM1Q86YR5 675 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 FAM219AQ8IW50 185 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 KLHDC8BQ8IXV7 354 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SLC39A7Q92504 469 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 MAL2Q969L2 176 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 ABHD1Q96SE0 405 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 RAD9AQ99638 391 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SRMSQ9H3Y6 488 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 MRPS30Q9NP92 439 aaKnown RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 PRDM5Q9NQX1 630 aaPredicted RBP6.46□□□□□ -1.37
CNOT4-205ENST00000423368 MMP24Q9Y5R2 645 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 SNX11Q9Y5W9 270 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 FER1L6Q2WGJ9 1857 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 COL1A2P08123 1366 aa6.46□□□□□ -1.37
CNOT4-205ENST00000423368 CACNA1DQ01668 2161 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 ZNF638Q14966 1978 aaKnown RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 A0A1B0GVI7 797 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 C9orf170A2RU37 121 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 OR2AT4A6NND4 320 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 TOX3O15405 576 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 TGOLN2O43493 480 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 EEDO75530 441 aaKnown RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 OR4F21O95013 312 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 GLUD1P00367 558 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 IFNA2P01563 188 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 FABP3P05413 133 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 TBXA2RP21731 343 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 CNR2P34972 360 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 TNFSF9P41273 254 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 HTR5AP47898 357 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 EVX1P49640 407 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 NDUFV1P49821 464 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 CDKN1CP49918 316 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 HTR6P50406 440 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 CDH4P55283 916 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 ARHGAP15Q53QZ3 475 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 ZNF678Q5SXM1 525 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 IRAK1BP1Q5VVH5 260 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 SUSD4Q5VX71 490 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 CEACAM20Q6UY09 585 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 PDZD4Q76G19 769 aaPredicted RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 ZNF367Q7RTV3 350 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 MISPQ8IVT2 679 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 CLEC4CQ8WTT0 213 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 LRFN5Q96NI6 719 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 MAPKAP1Q9BPZ7 522 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 YIPF4Q9BSR8 244 aa6.46□□□□□ -1.38
CNOT4-205ENST00000423368 EXOSC3Q9NQT5 275 aaKnown RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 DCAF13Q9NV06 445 aaKnown RBP6.46□□□□□ -1.38
CNOT4-205ENST00000423368 KCNIP3Q9Y2W7 256 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms