RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PRAMEF4O60810 478 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 SOX30O94993 753 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 SIX6O95475 246 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HIST1H2AGP0C0S8 130 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 CD8BP10966 210 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 DPEP1P16444 411 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HIST1H2ADP20671 130 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 ADH6P28332 368 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR1E1P30953 314 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 VIPR1P32241 457 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 THBS2P35442 1172 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 ASMTP46597 345 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HNMTP50135 292 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 MAZP56270 477 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 WDR5P61964 334 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 EFNB1P98172 346 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 BCL2L1Q07817 233 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 SP140Q13342 867 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HLXQ14774 488 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 SMAD2Q15796 467 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 SYT14P1Q58G82 188 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HACD4Q5VWC8 232 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 PRAMEF9Q5VWM5 478 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 CDCP2Q5VXM1 449 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 ZNF772Q68DY9 489 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 PTRHD1Q6GMV3 140 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 PLEKHH3Q7Z736 793 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 SLC30A8Q8IWU4 369 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 THEM5Q8N1Q8 247 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 EIF4E3Q8N5X7 224 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR6J1Q8NGC5 347 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR52N2Q8NGI0 321 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR4D10Q8NGI6 311 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR5M3Q8NGP4 307 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 CDC26Q8NHZ8 85 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 NEIL3Q8TAT5 605 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 SCARB1Q8WTV0 552 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 ABHD1Q96SE0 405 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 HIST1H2AJQ99878 128 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 TREX2Q9BQ50 279 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 TMED9Q9BVK6 235 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 CINPQ9BW66 212 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 ADGRE3Q9BY15 652 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 CHIAQ9BZP6 476 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 PITHD1Q9GZP4 211 aaPredicted RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 ZNF768Q9H5H4 540 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 BABAM2Q9NXR7 383 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 OR6C2Q9NZP2 312 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 ZFR2Q9UPR6 939 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 RUVBL1Q9Y265 456 aaKnown RBP5.73□□□□□ -1.49
CHD2-202ENST00000420239 PIKFYVEQ9Y2I7 2098 aa5.73□□□□□ -1.49
CHD2-202ENST00000420239 TRBC2A0A5B9 178 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 IRGMA1A4Y4 181 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 L7N2F9 121 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 RFXAPO00287 272 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
CHD2-202ENST00000420239 UGDHO60701 494 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SEMA7AO75326 666 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 KDM4BO94953 1096 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SLC25A14O95258 325 aaPredicted RBP5.72□□□□□ -1.49
CHD2-202ENST00000420239 MT-ND4P03905 459 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 CD3GP09693 182 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 ANKRD34CP0C6C1 535 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 LIMS3P0CW19 117 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 LIMS4P0CW20 117 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 ARAFP10398 606 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 JUPP14923 745 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 UGT2B7P16662 529 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 TACR2P21452 398 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 IDSP22304 550 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 GALP22466 123 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 CALCRP30988 508 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 TRIM23P36406 574 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 RFX3P48380 749 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 KCNJ5P48544 419 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 RAB13P51153 203 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 XKP51811 444 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 ARHGDIBP52566 201 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 LIM2P55344 173 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 CCL23P55773 120 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 RAG2P55895 527 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 TAP2Q03519 686 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 PLD1Q13393 1074 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SCARB2Q14108 478 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 PUM1Q14671 1186 aaKnown RBP eCLIP5.72□□□□□ -1.49
CHD2-202ENST00000420239 MELKQ14680 651 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 ZXDCQ2QGD7 858 aaPredicted RBP5.72□□□□□ -1.49
CHD2-202ENST00000420239 ZNF528Q3MIS6 628 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 PRAMEF19Q5SWL8 479 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SPOUT1Q5T280 376 aaKnown RBP5.72□□□□□ -1.49
CHD2-202ENST00000420239 GCNT6Q5T4J0 391 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 IDNKQ5T6J7 187 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 FRG2Q64ET8 278 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 NCEH1Q6PIU2 408 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 BTN2A1Q7KYR7 527 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SERPINA9Q86WD7 417 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 SPATA2LQ8IUW3 424 aaPredicted RBP5.72□□□□□ -1.49
CHD2-202ENST00000420239 NPAS3Q8IXF0 933 aa5.72□□□□□ -1.49
CHD2-202ENST00000420239 IL22RA1Q8N6P7 574 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms