RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FADDQ13158 208 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SCARB2Q14108 478 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PTPRRQ15256 657 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TRIP10Q15642 601 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TAB1Q15750 504 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SPATS1Q496A3 300 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MIDNQ504T8 468 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TCP11X2Q5H9J9 407 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ATAD3CQ5T2N8 411 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 C6orf52Q5T4I8 152 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ANXA8L1Q5VT79 327 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PRAMEF17Q5VTA0 474 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 UBE2UQ5VVX9 321 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PTRHD1Q6GMV3 140 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 DCUN1D2Q6PH85 259 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SHC4Q6S5L8 630 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TFAP2EQ6VUC0 442 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 C12orf54Q6X4T0 127 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NAPRTQ6XQN6 538 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 CLEC20AQ6ZU45 233 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 RRM2BQ7LG56 351 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PPP1R32Q7Z5V6 425 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MRGPREQ86SM8 312 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 CHSY1Q86X52 802 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 LGI4Q8N135 537 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 POU5F2Q8N7G0 328 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC37A3Q8NCC5 494 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TRPV3Q8NET8 790 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 OR52N2Q8NGI0 321 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 OR2A12Q8NGT7 310 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 CLHC1Q8NHS4 586 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 SETD6Q8TBK2 473 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MAGEE2Q8TD90 523 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 DNAJA4Q8WW22 397 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PATE1Q8WXA2 126 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 OR1E3Q8WZA6 343 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 RFKQ969G6 155 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF566Q969W8 418 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FUBP1Q96AE4 644 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 DUS3LQ96G46 650 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 RADILQ96JH8 1075 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 C9orf72Q96LT7 481 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FOPNLQ96NB1 174 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 QKIQ96PU8 341 aaKnown RBP eCLIP5.12□□□□□ -1.594e-7■■■■■ 27.1
ECHDC1-206ENST00000417628 OR5M11Q96RB7 305 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 CPPED1Q9BRF8 314 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NPLQ9BXD5 320 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PINK1Q9BXM7 581 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PIGUQ9H490 435 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 MVB12BQ9H7P6 319 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 AKIRIN1Q9H9L7 192 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NANOGQ9H9S0 305 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PLCXD1Q9NUJ7 323 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 DDX28Q9NUL7 540 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 NKIRAS2Q9NYR9 191 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 TAAR2Q9P1P5 351 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ABI3Q9P2A4 366 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 ABCD2Q9UBJ2 740 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 RIMS3Q9UJD0 308 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 VPS28Q9UK41 221 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PSME2Q9UL46 239 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 PCDHGB4Q9UN71 923 aa5.12□□□□□ -1.59
ECHDC1-206ENST00000417628 A0A0X1KG70 313 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 A0A1W2PPW3 197 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 SAC3D1A6NKF1 404 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 CLCA1A8K7I4 914 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 M0QYG6 137 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 KLF11O14901 512 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PAX4O43316 350 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 CST8O60676 142 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PRAMEF2O60811 474 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 UGT2B17O75795 530 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 BMP15O95972 392 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 IFNGP01579 166 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 RAB40ALP0C0E4 278 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PSKH1P11801 424 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PRPS2P11908 318 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 UNGP13051 313 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 IL7P13232 177 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PRG2P13727 222 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 CYP2A7P20853 494 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 MST1P26927 711 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 POU1F1P28069 291 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 GCAP28676 217 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 ADORA2BP29275 332 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 RAD52P43351 418 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 ALDH9A1P49189 494 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 VEGFCP49767 419 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 P2RY4P51582 365 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PPP5CP53041 499 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PLK1P53350 603 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 ITGA8P53708 1063 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 UGT2B15P54855 530 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 IL1RL1Q01638 556 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 CAV1Q03135 178 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 ILF3Q12906 894 aaKnown RBP eCLIP5.11□□□□□ -1.592e-7■■■■□ 19.4
ECHDC1-206ENST00000417628 TRAF2Q12933 501 aa5.11□□□□□ -1.59
ECHDC1-206ENST00000417628 PEX6Q13608 980 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms