RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DOHHQ9BU89 302 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 NUDT9Q9BW91 350 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 CXorf21Q9HAI6 301 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 CD93Q9NPY3 652 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 ATXN7L1Q9ULK2 861 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-211ENST00000413186 PCDHGA6Q9Y5G7 932 aa8.02□□□□□ -1.13
SYNE1-211ENST00000413186 H0YIG0 161 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF749O43361 778 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PCDHGA12O60330 932 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZFAND5O76080 213 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 MT-ND1P03886 318 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ALDOCP09972 364 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PET100P0DJ07 73 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CTSKP43235 329 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SPEM2Q0P670 501 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TRAM2Q15035 370 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RGNQ15493 299 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM214Q6NUQ4 689 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PGM2L1Q6PCE3 622 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ATG14Q6ZNE5 492 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PAQR7Q86WK9 346 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RNF175Q8N4F7 328 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SMYD1Q8NB12 490 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 OR52P1PQ8NH57 321 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF597Q96LX8 424 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 MCHR1Q99705 422 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 UCK1Q9HA47 277 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM181Q9P2C4 612 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF639Q9UID6 485 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NSG1A0A0A6YYJ2 146 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PLPP1O14494 284 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RFPL3O75679 317 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HLA-DQA2P01906 255 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CSN2P05814 226 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HCKP08631 526 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 FURINP09958 794 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ETFAP13804 333 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PSPHP78330 225 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SRSF5Q13243 272 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NKAIN1Q4KMZ8 207 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SFT2D3Q587I9 215 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TIGD3Q6B0B8 471 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SERPINA11Q86U17 422 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SLC35F3Q8IY50 421 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 GALNT15Q8N3T1 639 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PSMA8Q8TAA3 256 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TCTEX1D2Q8WW35 142 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 DNASE2BQ8WZ79 361 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TMBIM1Q969X1 311 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 DDX31Q9H8H2 851 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PRDM9Q9NQV7 894 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CMTM6Q9NX76 183 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ACSL6Q9UKU0 697 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ERVK-19Q9WJR5 959 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RIIAD1A6NNX1 92 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 AKAP8O43823 692 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 LDB3O75112 727 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RAD51DO75771 328 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RASAL1O95294 804 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 AHSA1O95433 338 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NUDT7P0C024 238 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SBK3P0C264 359 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SLC35E2P0CK97 266 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TACR1P25103 407 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SLC5A2P31639 672 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RAB5CP51148 216 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PAGE3Q5JUK9 113 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CPZQ66K79 652 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SLC48A1Q6P1K1 146 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ZCCHC12Q6PEW1 402 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 OR2T11Q8NH01 316 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 LRRC20Q8TCA0 184 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ASB15Q8WXK1 588 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TM4SF18Q96CE8 201 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NUAK2Q9H093 628 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 POLR2J3Q9H1A7 115 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 DHCR7Q9UBM7 475 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TBC1D24Q9ULP9 559 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 MED31Q9Y3C7 131 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PCDHGA7Q9Y5G6 932 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 IGHV1OR21-1A0A087WYE8 117 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 MYOCOSA0A1B0GUC4 107 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NPIPA2E9PIF3 369 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NPIPA5E9PKD4 350 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 NPIPA3F8WFD2 350 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 SLC33A1O00400 549 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TOX3O15405 576 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 IGLV3-19P01714 112 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 P04436 131 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 HMGN2P05204 90 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 PGCP20142 388 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 RRADP55042 308 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 TYW3Q6IPR3 259 aaKnown RBP8.01□□□□□ -1.13
SYNE1-211ENST00000413186 FAM71E1Q6IPT2 247 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 JAZF1Q86VZ6 243 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ADGRF3Q8IZF5 1079 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 ESX1Q8N693 406 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 CLEC1AQ8NC01 280 aa8.01□□□□□ -1.13
SYNE1-211ENST00000413186 OR10G2Q8NGC3 310 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms