RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 THSD7BQ9C0I4 1608 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CFAP47Q6ZTR5 3102 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAPPA2Q9BXP8 1791 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CNTNAP1P78357 1384 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGHV3OR16-12A0A075B7B8 117 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGLV9-49A0A0B4J1Y8 123 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GJE1A6NN92 205 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 H0YGG7 62 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 H0YIN7 160 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SGK1O00141 431 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SAP18O00422 153 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 E2F3O00716 465 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KIF3BO15066 747 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 LDLRAD4O15165 306 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 UBDO15205 165 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 RNF113AO15541 343 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PHGDHO43175 533 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNHIT1O43257 154 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ADCY3O60266 1144 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PIP5K1CO60331 668 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRAF2O60831 178 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KINO60870 393 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMCC2O75069 709 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SURF6O75683 361 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CNMDO75829 334 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CEACAM4O75871 244 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SNUPNO95149 360 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLF8O95600 359 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 BAG3O95817 575 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MLYCDO95822 493 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PDGFBP01127 241 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 VTNP04004 478 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 RLN2P04090 185 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GNAI3P08754 354 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 NBPF7P0C2Y1 421 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 DHRS4L1P0CG22 281 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC2A2P11168 524 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GABRA1P14867 456 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPX2P18283 190 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATF1P18846 271 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDH2P19022 906 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 AOC1P19801 751 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLRC1P26715 233 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSMB4P28070 264 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMOD1P28289 359 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 EPHA2P29317 976 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 BLVRBP30043 206 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 LRPAP1P30533 357 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PGM1P36871 562 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRPHP41219 470 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 KCNJ1P48048 391 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 AMPHP49418 695 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC5A3P53794 718 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MLF1P58340 268 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 RPS15P62841 145 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GNAI1P63096 354 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDK17Q00537 523 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSG4Q00888 419 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 IRF8Q02556 426 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC3A1Q07837 685 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CD47Q08722 323 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TFCP2Q12800 502 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPR50Q13585 617 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACVR2BQ13705 512 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CBFBQ13951 182 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAFAH1B3Q15102 231 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PSG5Q15238 335 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PTPN14Q15678 1187 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ADIPOQQ15848 244 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 NFE2L2Q16236 605 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SYPL1Q16563 259 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CAMK4Q16566 473 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC96Q2M329 555 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF829Q3KNS6 432 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 MMEL1Q495T6 779 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 BMP2KLQ5H9B9 411 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC35D3Q5M8T2 416 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 IZUMO3Q5VZ72 239 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TEX36Q5VZQ5 186 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR7E24Q6IFN5 339 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CSAG1Q6PB30 78 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CPLX2Q6PUV4 134 aaKnown RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CORO6Q6QEF8 472 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF493Q6ZR52 646 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 Q6ZRX8 168 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 DEFB132Q7Z7B7 95 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR86Q86TI4 376 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PIGZQ86VD9 579 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 TGIF2LXQ8IUE1 241 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC13Q8IYE1 715 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR9K2Q8NGE7 335 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR8K1Q8NGG5 319 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR10G7Q8NGN6 311 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 GOT1L1Q8NHS2 421 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SGMS2Q8NHU3 365 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 VANGL1Q8TAA9 524 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 C9orf43Q8TAL5 461 aaPredicted RBP-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPP1R35Q8TAP8 253 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARRDC2Q8TBH0 407 aa-1.95□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC7A13Q8TCU3 470 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms