RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 NLE1Q9NVX2 485 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 HLA-DPB1P04440 258 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 JAG1P78504 1218 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 DAG1Q14118 895 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF718Q3SXZ3 478 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 DCAF12L1Q5VU92 463 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 MAMDC2Q7Z304 686 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 GOSR2O14653 212 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 CNIH1O95406 144 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SNAI1O95863 264 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 YES1P07947 543 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC18A1P54219 525 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ARSFP54793 590 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 KCNJ11Q14654 390 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ACSBG2Q5FVE4 666 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 LARP4Q71RC2 724 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR6C1Q96RD1 312 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR10A2Q9H208 303 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 EXOSC1Q9Y3B2 195 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PI4KAP42356 2102 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 hCG_1809904A0A1W2PP81 198 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 A0A1W2PPE2 198 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 A0A1W2PR64 198 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 A0A1W2PRV1 198 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF254O75437 659 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PTHP01270 115 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PTGR1Q14914 329 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 STEAP4Q687X5 459 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 IL20RBQ6UXL0 311 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 TMEM130Q8N3G9 435 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ST6GALNAC4Q9H4F1 302 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 POLE4Q9NR33 117 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PLEK2Q9NYT0 353 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 GJD2Q9UKL4 321 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 LCMT2O60294 686 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR8U9P0C7N5 309 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ANXA7P20073 488 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 DAP3P51398 398 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ACY1Q03154 408 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PLA2G7Q13093 441 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 MOGSQ13724 837 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 KCNC3Q14003 757 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ERV3-1Q14264 604 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 KIAA1614Q5VZ46 1190 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR4K13Q8NH42 304 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ARRDC3Q96B67 414 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 EBF2Q9HAK2 575 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SPTBP11277 2137 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 EBLN1P0CF75 366 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SGSHP51688 502 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PRICKLE2Q7Z3G6 844 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 HS3ST5Q8IZT8 346 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR7G1Q8NGA0 311 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 OR2A12Q8NGT7 310 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF566Q969W8 418 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 SH2D7A6NKC9 451 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 LDB3O75112 727 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TMEM63AO94886 807 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PPP1R3DO95685 299 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 EDN1P05305 212 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ARSAP15289 507 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PBX2P40425 430 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 CAV2P51636 162 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ROR2Q01974 943 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 LINC00696Q6ZRV3 163 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ASRGL1Q7L266 308 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 RBMXL3Q8N7X1 1067 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 MEPEQ9NQ76 525 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF44P15621 663 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PTP4A2Q12974 167 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 C22orf42Q6IC83 251 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 OR52N2Q8NGI0 321 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 C10orf82Q8WW14 230 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 LOC105369274A0A096LPK9 316 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 CRYBA1P05813 215 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 PTH2RP49190 550 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 NKAIN2Q5VXU1 208 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF440Q8IYI8 595 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 OR4N4Q8N0Y3 316 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 FITM2Q8N6M3 262 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 C12orf42Q96LP6 360 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 C7orf50Q9BRJ6 194 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 FAM124BQ9H5Z6 455 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 CEBPZOSA8MTT3 80 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 AHSGP02765 367 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 GINS1Q14691 196 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 KIAA1211LQ6NV74 962 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 SHFQ7M4L6 423 aa10.65□□□□□ -0.7
PRPF40A-202ENST00000410080 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms