RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 IL12BP29460 328 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CD97P48960 835 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 GSK3BP49841 420 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 DCAF7P61962 342 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 FADDQ13158 208 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 GPR68Q15743 365 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CRB2Q5IJ48 1285 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 COLEC12Q5KU26 742 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ATAD3BQ5T9A4 648 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SPINK14Q6IE38 97 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ISLR2Q6UXK2 745 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 BNC2Q6ZN30 1099 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 TAGAPQ8N103 731 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CATSPER1Q8NEC5 780 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SIGLEC12Q96PQ1 595 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SDF2Q99470 211 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 BTBD10Q9BSF8 475 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 HES7Q9BYE0 225 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 TMEM181Q9P2C4 612 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 P2RX2Q9UBL9 471 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 EGFL7Q9UHF1 273 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CORO2BQ9UQ03 480 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 NINQ8N4C6 2090 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 DUXAA6NLW8 204 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ICOSLGO75144 302 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 TFPTP0C1Z6 253 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CYP4B1P13584 511 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 NCK1P16333 377 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 KRT20P35900 424 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CD96P40200 585 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SOX8P57073 446 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 AP2B1P63010 937 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CHRNEQ04844 493 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 CEACAM7Q14002 265 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SCARB2Q14108 478 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 DECR1Q16698 335 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 HEPHL1Q6MZM0 1159 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 MDGA2Q7Z553 956 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ZNF614Q8N883 585 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 GATSQ8NAP1 163 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 C17orf47Q8NEP4 570 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ZG16BQ96DA0 208 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 HSPBAP1Q96EW2 488 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ABHD17AQ96GS6 310 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 NODALQ96S42 347 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 SH3GL1Q99961 368 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 KCTD14Q9BQ13 255 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ALG2Q9H553 416 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 PRORYQ9H606 182 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 EXD2Q9NVH0 621 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 ABCD2Q9UBJ2 740 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 TEKT2Q9UIF3 430 aa12.98□□□□□ -0.33
CHRNA1-204ENST00000409323 TO15178 435 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ACOX3O15254 700 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ASNA1O43681 348 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 TSPAN2O60636 221 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 PPM1BO75688 479 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CEACAM4O75871 244 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ARAFP10398 606 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 NQO1P15559 274 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ANXA11P50995 505 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ARG2P78540 354 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CDK6Q00534 326 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 FOXK2Q01167 660 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 MFAP5Q13361 173 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ZNF791Q3KP31 576 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ARHGAP11BQ3KRB8 267 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CYP27C1Q4G0S4 372 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 TUBA3EQ6PEY2 450 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 FRRS1Q6ZNA5 592 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ZNF227Q86WZ6 799 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 LSRQ86X29 649 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CALHM3Q86XJ0 350 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CYP4Z2PQ8N1L4 340 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 OR2T12Q8NG77 320 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 OR4C3Q8NH37 302 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 SNRNP27Q8WVK2 155 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 DIO2Q92813 273 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 CCDC124Q96CT7 223 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 SPACA9Q96E40 222 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ARHGAP9Q9BRR9 750 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 ZNF71Q9NQZ8 489 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 KLHL1Q9NR64 748 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 GMEB1Q9Y692 573 aa12.97□□□□□ -0.33
CHRNA1-204ENST00000409323 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 GMFGO60234 142 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 DNAJA2O60884 412 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 UTS2O95399 124 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms