RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MARCH9Q86YJ5 346 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 MMP21Q8N119 569 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF687Q8N1G0 1237 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OR7G1Q8NGA0 311 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OR52N2Q8NGI0 321 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 C9orf43Q8TAL5 461 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PPP1R35Q8TAP8 253 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF480Q8WV37 535 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CNN2Q99439 309 aaKnown RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 MYNNQ9NPC7 610 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OBP2BQ9NPH6 170 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 FARSAQ9Y285 508 aaKnown RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 KLF13Q9Y2Y9 288 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 WIF1Q9Y5W5 379 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 DPPA5A6NC42 116 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 TEX46H3BTG2 121 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OR2T1O43869 369 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OXSR1O95747 527 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PLATP00750 562 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CSN2P05814 226 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 HIST1H1TP22492 207 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 NR4A1P22736 598 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CARD18P57730 90 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CTXN1P60606 82 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PPP2CBP62714 309 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PPP2CAP67775 309 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CXADRP78310 365 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 BNIP3Q12983 259 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 EIF2B1Q14232 305 aaKnown RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 GRB7Q14451 532 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PPP1R3AQ16821 1122 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 ALG10Q5BKT4 473 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CWF19L1Q69YN2 538 aaKnown RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 SHFQ7M4L6 423 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 ARFGAP1Q8N6T3 406 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OR7G3Q8NG95 312 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 C15orf40Q8WUR7 153 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 TMEM19Q96HH6 336 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 OR4K3Q96R72 315 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 NODALQ96S42 347 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 WDR83Q9BRX9 315 aaKnown RBP4.73□□□□□ -1.65
SCN3A-203ENST00000409101 PCDHAC1Q9H158 963 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CHRDQ9H2X0 955 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 TRPV4Q9HBA0 871 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 FAM86C1Q9NVL1 165 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 AIG1Q9NVV5 245 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 DNAJC27Q9NZQ0 273 aa4.73□□□□□ -1.65
SCN3A-203ENST00000409101 CHP2O43745 196 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 AIREO43918 545 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 EEDO75530 441 aaKnown RBP4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF432O94892 652 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ENPP1P22413 925 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 CCR2P41597 374 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 STARP49675 285 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 KCNAB1Q14722 419 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF423Q2M1K9 1284 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 PYCR3Q53H96 274 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 VWA2Q5GFL6 755 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 MEDAGQ5VYS4 303 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 AFMIDQ63HM1 303 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 GFRALQ6UXV0 394 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 LAS2Q8IYD9 372 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF610Q8N9Z0 462 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 PSD4Q8NDX1 1056 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 OR52B6Q8NGF0 335 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 OR2T4Q8NH00 348 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 WFDC5Q8TCV5 224 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 PROKR1Q8TCW9 393 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 RAB39BQ96DA2 213 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 FAM129BQ96TA1 746 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 C1orf21Q9H246 121 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 CALHM2Q9HA72 323 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 UBQLN4Q9NRR5 601 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ANKRD10Q9NXR5 420 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ABRACLQ9P1F3 81 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 CLEC4EQ9ULY5 219 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 SLC7A7Q9UM01 511 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 PCDHA9Q9Y5H5 950 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 FAM166BA8MTA8 275 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 DIRAS1O95057 198 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 NADKO95544 446 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-203ENST00000409101 RLN2P04090 185 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 DCKP27707 260 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 GRPRP30550 384 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 DCTP40126 519 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 RORCP51449 518 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ERVPABLB-1P60509 514 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 REEP5Q00765 189 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 BLMHQ13867 455 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 GINS1Q14691 196 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 SWI5Q1ZZU3 235 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ATAD3CQ5T2N8 411 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 HBMQ6B0K9 141 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 TMEM71Q6P5X7 295 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 LRFN4Q6PJG9 635 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 B3GNT6Q6ZMB0 384 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 ANKK1Q8NFD2 765 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 OR9I1Q8NGQ6 314 aa4.72□□□□□ -1.65
SCN3A-203ENST00000409101 MCFD2Q8NI22 146 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms