RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 S100PP25815 95 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 RPS25P62851 125 aaKnown RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 SAMD8Q96LT4 415 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 PLSCR3Q9NRY6 295 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 CSNK1G3Q9Y6M4 447 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 FXYD1O00168 92 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 PPM1AP35813 382 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 TGM4P49221 684 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 TBPL1P62380 186 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 GPR17Q13304 367 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 FAM122BQ7Z309 247 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 ZNF550Q7Z398 422 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 NDRG2Q9UN36 371 aaKnown RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 H7C417 338 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 CXCR1P25024 350 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 PEA15Q15121 130 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 RAB11BQ15907 218 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 ARSIQ5FYB1 569 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 PXKQ7Z7A4 578 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 LRRTM4Q86VH4 590 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 BOLLQ8N9W6 283 aaKnown RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 ZNF527Q8NB42 609 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 IL17RDQ8NFM7 739 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 DDX31Q9H8H2 851 aaKnown RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 TSPAN6O43657 245 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 CSO75390 466 aaKnown RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 IFNA2P01563 188 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 CAMLGP49069 296 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 RAB5CP51148 216 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 ZNF140P52738 457 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 C22orf39Q6P5X5 142 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-202ENST00000409031 CNIH4Q9P003 139 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 SLC6A5Q9Y345 797 aa16.73■□□□□ 0.27
SMPD4-202ENST00000409031 A0A0G2JLL6 359 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 TRDV1A0A1B0GX56 115 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 CASC3O15234 703 aaKnown RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 KCNK5O95279 499 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 CAP1Q01518 475 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 APOOLQ6UXV4 268 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 PRRT2Q7Z6L0 340 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RIMKLAQ8IXN7 391 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 SLC22A15Q8IZD6 547 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 OR5T3Q8NGG3 340 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 HAVCR2Q8TDQ0 301 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 AHCYL2Q96HN2 611 aaKnown RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 PRRC1Q96M27 445 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 POLDIP3Q9BY77 421 aaKnown RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 SLIRPQ9GZT3 109 aaKnown RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 KCNJ16Q9NPI9 418 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 TLX3O43711 291 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RAB40ALP0C0E4 278 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 MTNR1BP49286 362 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RPS26P11Q5JNZ5 115 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 PRSS55Q6UWB4 352 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 NXPE4Q6UWF7 544 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RBM23Q86U06 439 aaKnown RBP16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RAB40AQ8WXH6 277 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 DCUN1D4Q92564 292 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 SRMSQ9H3Y6 488 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 SYNPO2LQ9H987 977 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 DHDHQ9UQ10 334 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 GASTP01350 101 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 CLCNKAP51800 687 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 Q6ZVU0 165 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 PXT1Q8NFP0 134 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 SSX3Q99909 188 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 CDCA4Q9BXL8 241 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 GABARAPL1Q9H0R8 117 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 Q9N2J8 555 aa16.72■□□□□ 0.27
SMPD4-202ENST00000409031 MROH6A6NGR9 719 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 GSRP00390 522 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 CLEC2LP0C7M8 214 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 LSSP48449 732 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 NKX6-1P78426 367 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 HMGN2P46Q86SG4 172 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 OR8J2Q8NGG1 315 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SFXN2Q96NB2 322 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 ZIC5Q96T25 663 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 CDC6Q99741 560 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 A8MUA0 341 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 H7BY64 318 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 RGS13O14921 159 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 MAS1P04201 325 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 AKR1C4P17516 323 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 KIAA1024LP59773 190 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 TLE2Q04725 743 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 HTR4Q13639 388 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 MAPK14Q16539 360 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 C14orf28Q4W4Y0 310 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 XKR7Q5GH72 579 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 TMEM145Q8NBT3 493 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 OR6F1Q8NGZ6 308 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 SLC25A36Q96CQ1 311 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 PRAP1Q96NZ9 151 aa16.71■□□□□ 0.27
SMPD4-202ENST00000409031 TREX2Q9BQ50 279 aaPredicted RBP16.71■□□□□ 0.27
SMPD4-202ENST00000409031 QRSL1Q9H0R6 528 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms