RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 IFNEQ86WN2 208 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 CALHM3Q86XJ0 350 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 SLC38A5Q8WUX1 472 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 DIO2Q92813 273 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 SPACA9Q96E40 222 aaPredicted RBP30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 MRTO4Q9UKD2 239 aaKnown RBP30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 PACSIN3Q9UKS6 424 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 USP22Q9UPT9 525 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 LIPT1Q9Y234 373 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 BOD1L1Q8NFC6 3051 aa30.65■■■□□ 2.5
CSNK1E-204ENST00000403904 ATP5HO75947 161 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 IL33O95760 270 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 BCHEP06276 602 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 NR2F1P10589 423 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 HLCSP50747 726 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 OC90Q02509 493 aaPredicted RBP30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 MAPK11Q15759 364 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 ZNF791Q3KP31 576 aaPredicted RBP30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 ZAR1Q86SH2 424 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 PTOV1Q86YD1 416 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 UTP23Q9BRU9 249 aaKnown RBP30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 A4GALTQ9NPC4 353 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 HPF1Q9NWY4 346 aa30.64■■■□□ 2.5
CSNK1E-204ENST00000403904 SLC28A2O43868 658 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 UGT2B11O75310 529 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 AK1P00568 194 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 NAGAP17050 411 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 CD96P40200 585 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 CYB561P49447 251 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 TMED10P49755 219 aaKnown RBP30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 LIPEQ05469 1076 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 TUBA3CQ13748 450 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 TUBA3EQ6PEY2 450 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 NET1Q7Z628 596 aaPredicted RBP30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 ABHD17AQ96GS6 310 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 COL21A1Q96P44 957 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 TMEM38AQ9H6F2 299 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 AP3M1Q9Y2T2 418 aa30.63■■■□□ 2.49
CSNK1E-204ENST00000403904 FCMRO60667 390 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 ARAFP10398 606 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 PNLIPRP2P54317 469 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 PSMD4P55036 377 aaKnown RBP30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 NTRK2Q16620 822 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 IGFL2Q6UWQ7 119 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 ZZZ3Q8IYH5 903 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 RNF148Q8N7C7 305 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 FAM13CQ8NE31 585 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 TMEM19Q96HH6 336 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 TRNT1Q96Q11 434 aaKnown RBP30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 ARHGAP9Q9BRR9 750 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 G6PC3Q9BUM1 346 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 NBEAQ8NFP9 2946 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 TMEM247A6NEH6 219 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 OR6C70A6NIJ9 312 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 GYG2O15488 501 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 HNRNPCL1O60812 293 aaKnown RBP30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 H6PDO95479 791 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 CHRM4P08173 479 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 CPEB4Q17RY0 729 aaKnown RBP eCLIP30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 CYP4Z2PQ8N1L4 340 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 OR10G3Q8NGC4 313 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 NFKBIDQ8NI38 313 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 BTBD10Q9BSF8 475 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 ALG2Q9H553 416 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 RUBCNLQ9H714 662 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 LRFN1Q9P244 771 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 MKLN1Q9UL63 735 aa30.62■■■□□ 2.49
CSNK1E-204ENST00000403904 K7EM74 188 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 STX11O75558 287 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 ZIC2O95409 532 aaPredicted RBP30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 PDGFAP04085 211 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 FAM87AP0C7U9 286 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 ATP6V1C1P21283 382 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 CASRP41180 1078 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 EEFSECP57772 596 aaKnown RBP30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 ARG2P78540 354 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 CDK6Q00534 326 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 BNC2Q6ZN30 1099 aaPredicted RBP30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 HAS2Q92819 552 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 ZNF350Q9GZX5 532 aa30.61■■■□□ 2.49
CSNK1E-204ENST00000403904 CYP4B1P13584 511 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 GSK3BP49841 420 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 RASSF2P50749 326 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 HPCAP84074 193 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 ZNF227Q86WZ6 799 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 C11orf65Q8NCR3 313 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 OR2T12Q8NG77 320 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 REXO5Q96IC2 774 aaKnown RBP30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 SIGLEC12Q96PQ1 595 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 SPATA9Q9BWV2 254 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 RNF32Q9H0A6 362 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 RYDENQ9NUL5 291 aaKnown RBP30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 FLRT3Q9NZU0 649 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 WDR45Q9Y484 360 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 PIEZO2Q9H5I5 2752 aa30.6■■■□□ 2.49
CSNK1E-204ENST00000403904 EML6Q6ZMW3 1958 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 OR5H15A6NDH6 313 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 PRORSD1PA6NEY8 169 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 ABCB7O75027 752 aa30.59■■■□□ 2.49
CSNK1E-204ENST00000403904 CHRNEQ04844 493 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms