RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 GFRA1P56159 465 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 NSUN5P2Q63ZY6 315 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 OR14L1PQ8NHC6 308 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 ZBTB9Q96C00 473 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 PKNOX2Q96KN3 472 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 PPP3R2Q96LZ3 170 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 ZNF395Q9H8N7 513 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-203ENST00000400772 ACSS1Q9NUB1 689 aaPredicted RBP14.41□□□□□ -0.1
ATG4B-203ENST00000400772 NTMQ9P121 344 aa14.41□□□□□ -0.1
ATG4B-203ENST00000400772 MRPS18CQ9Y3D5 142 aaKnown RBP14.41□□□□□ -0.1
ATG4B-203ENST00000400772 GXYLT2A0PJZ3 443 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 CD8B2A6NJW9 211 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 HSPB2A8KAH6 182 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ESPNB1AK53 854 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 LYPLA1O75608 230 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 IGKV1D-16P01601 117 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 PRPS2P11908 318 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 CPN1P15169 458 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 EFNA1P20827 205 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ASMTP46597 345 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 SERPINB4P48594 390 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 STARP49675 285 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 DLX5P56178 289 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 MRPS22P82650 360 aaKnown RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 HSPB2Q16082 182 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 DECR1Q16698 335 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 SLC25A35Q3KQZ1 300 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 C6orf136Q5SQH8 315 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 LACC1Q8IV20 430 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 NUDCD3Q8IVD9 361 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 TRIM42Q8IWZ5 723 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 FADS6Q8N9I5 356 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 RELL2Q8NC24 303 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ZPLD1Q8TCW7 415 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 NUDT8Q8WV74 236 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 PIK3R3Q92569 461 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 MTERF3Q96E29 417 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 TRIB1Q96RU8 372 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 Q9N2J8 555 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 SSU72Q9NP77 194 aaKnown RBP14.4□□□□□ -0.1
ATG4B-203ENST00000400772 TAS2R10Q9NYW0 307 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ATP6V1HQ9UI12 483 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 ABCA12Q86UK0 2595 aa14.4□□□□□ -0.1
ATG4B-203ENST00000400772 AKAP9Q99996 3911 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 WDR91A4D1P6 747 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 SCO2O43819 266 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 SKAP2O75563 359 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-203ENST00000400772 NKX2-2O95096 273 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 GPC1P35052 558 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ZNF136P52737 540 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 PRKAG1P54619 331 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 B3GALT5-AS1P59052 145 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 TLE4Q04727 773 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 MPP2Q14168 576 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ZNHIT3Q15649 155 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ATP6AP1LQ52LC2 224 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 EXOSC6Q5RKV6 272 aaKnown RBP14.39□□□□□ -0.11
ATG4B-203ENST00000400772 LRIG3Q6UXM1 1119 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 APOOLQ6UXV4 268 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ADGRE4PQ86SQ3 457 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 IFNEQ86WN2 208 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 NUP43Q8NFH3 380 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 OR2M3Q8NG83 312 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 OR7A2PQ8NGA2 310 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ZFP28Q8NHY6 868 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 ZIM3Q96PE6 472 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 TUBA1CQ9BQE3 449 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 G6PC3Q9BUM1 346 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 C1orf50Q9BV19 199 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 C20orf27Q9GZN8 174 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 DSN1Q9H410 356 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 CALHM2Q9HA72 323 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 EQTNQ9NQ60 294 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 SIRT3Q9NTG7 399 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-203ENST00000400772 DCHS2Q6V1P9 2916 aa14.39□□□□□ -0.11
ATG4B-203ENST00000400772 PCNX3Q9H6A9 2034 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MBD3L4A6NDZ8 208 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MBD3L3A6NE82 208 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MBD3L5A6NJ08 208 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-203ENST00000400772 TTC36A6NLP5 189 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 SCAMP2O15127 329 aaKnown RBP14.38□□□□□ -0.11
ATG4B-203ENST00000400772 ACP2P11117 423 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 LAMP1P11279 417 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 DPP4P27487 766 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MAPK1P28482 360 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 RFX3P48380 749 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 LHX2P50458 406 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 PTGR1Q14914 329 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MLC1Q15049 377 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 SF3B4Q15427 424 aaKnown RBP eCLIP14.38□□□□□ -0.116e-9■■■□□ 18.7
ATG4B-203ENST00000400772 CHI3L2Q15782 390 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 CEP85LQ5SZL2 805 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 IL23RQ5VWK5 629 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 R3HCC1LQ7Z5L2 792 aaKnown RBP14.38□□□□□ -0.11
ATG4B-203ENST00000400772 MARCH3Q86UD3 253 aa14.38□□□□□ -0.11
ATG4B-203ENST00000400772 C9orf106Q8NAJ2 232 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms