RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C21orf33P30042 268 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 TMED10P49755 219 aaKnown RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 NKG7Q16617 165 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 SCAIQ8N9R8 606 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 CLEC1BQ9P126 229 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 POLR1CO15160 346 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 ACOX3O15254 700 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 GP1BBP13224 206 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 FCARP24071 287 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 SPHARQ15513 63 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 MR1Q95460 341 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
SCAF4-202ENST00000399804 PAIP2BQ9ULR5 123 aaKnown RBP13.16□□□□□ -0.3
SCAF4-202ENST00000399804 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 KCNJ5P48544 419 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 LIM2P55344 173 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 OR10H5Q8NGA6 315 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 OR6T1Q8NGN1 323 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 MOSPD2Q8NHP6 518 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 ZFPM2Q8WW38 1151 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SECISBP2Q96T21 854 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 A4GALTQ9NPC4 353 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SPTY2D1-AS1A0A0U1RR47 76 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 CCRL2O00421 344 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 YY2O15391 372 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 TBX1O43435 398 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 CELP19835 753 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 DCKP27707 260 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 PPP2R2BQ00005 443 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 DMPKQ09013 629 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 GTF2IRD2BQ6EKJ0 949 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 GTF2IRD2Q86UP8 949 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SMRP1Q8NCR6 262 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 FAR1Q8WVX9 515 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SMPDL3BQ92485 455 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 HTRA1Q92743 480 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 DHCR7Q9UBM7 475 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SMIM30A4D0T7 59 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 J3QLW9 94 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 RAB36O95755 333 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 MRPL3P09001 348 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF19P17023 458 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 HK1P19367 917 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 RAB38P57729 211 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
SCAF4-202ENST00000399804 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SYT13Q7L8C5 426 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 NUP54Q7Z3B4 507 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 PRR22Q8IZ63 422 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 AMER3Q8N944 861 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 TMED9Q9BVK6 235 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 TTTY10Q9BZA0 68 aa13.15□□□□□ -0.3
SCAF4-202ENST00000399804 CHMP24386 653 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.31
SCAF4-202ENST00000399804 NR0B1P51843 470 aaKnown RBP13.15□□□□□ -0.31
SCAF4-202ENST00000399804 TRMT12Q53H54 448 aaKnown RBP13.15□□□□□ -0.31
SCAF4-202ENST00000399804 B3GNT8Q7Z7M8 397 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 OR51Q1Q8NH59 317 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 KCTD7Q96MP8 289 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.31
SCAF4-202ENST00000399804 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CENPXA8MT69 81 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 HMGN4O00479 90 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 MBTPS2O43462 519 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 NCS1P62166 190 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 ENTPD8Q5MY95 495 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 SAXO2Q658L1 398 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 SHFQ7M4L6 423 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM156Q8N614 296 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 ACOT11Q8WXI4 607 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 KCNN2Q9H2S1 579 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 CUTCQ9NTM9 273 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 A0A1W2PQF6 199 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 HOXB3P14651 431 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-202ENST00000399804 KCNJ10P78508 379 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 DSG2Q14126 1118 aa13.14□□□□□ -0.31
SCAF4-202ENST00000399804 MARCH9Q86YJ5 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms