RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 KLHL28Q9NXS3 571 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 GRHL1Q9NZI5 618 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 CPSF2Q9P2I0 782 aaKnown RBP7.91□□□□□ -1.14
CAPN3-208ENST00000397204 PLLPQ9Y342 182 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 USF3Q68DE3 2245 aa7.91□□□□□ -1.14
CAPN3-208ENST00000397204 MED12LQ86YW9 2145 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 A0A096LPK6 155 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 HMX2A2RU54 273 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SLC22A20A6NK97 555 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 STX16-NPEPL1H3BU86 382 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 STX16O14662 325 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 TSPAN2O60636 221 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 TMCC2O75069 709 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CGAP01215 116 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CD8BP10966 210 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PCSK2P16519 638 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 GRK2P25098 689 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PCSK6P29122 969 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 KRT20P35900 424 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 UGT2B10P36537 528 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CPOXP36551 454 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 KIR2DL2P43627 348 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 GATA4P43694 442 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PNLIPRP2P54317 469 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 GAS1P54826 345 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 DSCR4P56555 118 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 B3GALT5-AS1P59052 145 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 MRPS25P82663 173 aaKnown RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 OCRLQ01968 901 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 GGTA1PQ4G0N0 100 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SGO1Q5FBB7 561 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF474Q6S9Z5 364 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SHISA2Q6UWI4 295 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PLXDC2Q6UX71 529 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PLEKHM3Q6ZWE6 761 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 LARP4Q71RC2 724 aaKnown RBP eCLIP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 COMMD6Q7Z4G1 85 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CCDC25Q86WR0 208 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CNEP1R1Q8N9A8 125 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SPATA4Q8NEY3 305 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 OR52B6Q8NGF0 335 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF675Q8TD23 568 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 RNF138Q8WVD3 245 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CAVIN3Q969G5 261 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 KLHL29Q96CT2 875 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PHF21BQ96EK2 531 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CNRIP1Q96F85 164 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 MARK4Q96L34 752 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 BTBD9Q96Q07 612 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 ADOQ96SZ5 270 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 CCL19Q99731 98 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 UBTD1Q9HAC8 227 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 ZBTB26Q9HCK0 441 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 EHD3Q9NZN3 535 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 VPS29Q9UBQ0 182 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 FBXL2Q9UKC9 423 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 PCTPQ9UKL6 214 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SNX6Q9UNH7 406 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 SLC12A4Q9UP95 1085 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 TRIM33Q9UPN9 1127 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 UTP11Q9Y3A2 253 aaKnown RBP7.9□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF175Q9Y473 711 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 WIF1Q9Y5W5 379 aa7.9□□□□□ -1.14
CAPN3-208ENST00000397204 TRIM64A6NGJ6 449 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 TRIM64BA6NI03 449 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 SMAD7O15105 426 aaKnown RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 RAD51CO43502 376 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 SMIM24O75264 130 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 CNOT4O95628 575 aaKnown RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 OTCP00480 354 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 ALDOAP04075 364 aaKnown RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 COL6A2P12110 1019 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 POU2F1P14859 743 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 PAX1P15863 534 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 PPP3CBP16298 524 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 TBXA2RP21731 343 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 KCNJ5P48544 419 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 DUSP2Q05923 314 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 GALNT1Q10472 559 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 TRAF3Q13114 568 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 DOC2BQ14184 412 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 GLYR1Q49A26 553 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 TECRLQ5HYJ1 363 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 OR5M10Q6IEU7 315 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 ALKBH2Q6NS38 261 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 VWA1Q6PCB0 445 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 SH2D5Q6ZV89 423 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 LRRN4CLQ8ND94 238 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 OR4F6Q8NGB9 312 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 OR4K17Q8NGC6 315 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 PPP1R14CQ8TAE6 165 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 FBXO25Q8TCJ0 367 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 SELENOMQ8WWX9 145 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 FIG4Q92562 907 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 PERPQ96FX8 193 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF845Q96IR2 970 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 VSTM2LQ96N03 204 aa7.89□□□□□ -1.15
CAPN3-208ENST00000397204 OPN3Q9H1Y3 402 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-208ENST00000397204 SDHAF3Q9NRP4 125 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms