RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SLC36A4Q6YBV0 504 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 KIAA0907Q7Z7F0 614 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 NR2C2APQ86WQ0 139 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 OR2M2Q96R28 347 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 UBL7Q96S82 380 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 TREX2Q9BQ50 279 aaPredicted RBP22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 SLC46A2Q9BY10 475 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 GSX2Q9BZM3 304 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 DPAGT1Q9H3H5 408 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 CNIH4Q9P003 139 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 KCMF1Q9P0J7 381 aa22.54■■□□□ 1.2
CSNK1E-203ENST00000396832 PRAMEF27A3QJZ7 478 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 BMP8BP34820 402 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 SMIM11AP58511 58 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 NXPE4Q6UWF7 544 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 LIPIQ6XZB0 460 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 CHMP1BQ7LBR1 199 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 BMP8AQ7Z5Y6 402 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 MS4A15Q8N5U1 240 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 OR5M3Q8NGP4 307 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 KLK6Q92876 244 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 HGDQ93099 445 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 KLHL15Q96M94 604 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 EFCAB11Q9BUY7 163 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 RBCK1Q9BYM8 510 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 A0A1W2PPL8 197 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 HOXA2O43364 376 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 TCRBP04435 133 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 BUD31P41223 144 aaPredicted RBP22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 BHLHB9Q6PI77 547 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 GPR135Q8IZ08 494 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 ART5Q96L15 291 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 ZNF354BQ96LW1 612 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 C1QTNF6Q9BXI9 259 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 TEX10Q9NXF1 929 aaPredicted RBP22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 MAB21L2Q9Y586 359 aa22.53■■□□□ 1.2
CSNK1E-203ENST00000396832 TOR1AO14656 332 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 GLULP15104 373 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 RPL6Q02878 288 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 MINDY4Q4G0A6 757 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 PIAS4Q8N2W9 510 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 AMER3Q8N944 861 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 ACOT12Q8WYK0 555 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 DACT3Q96B18 629 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 FNDC11Q9BVV2 318 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 SAP130Q9H0E3 1048 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 C11orf49Q9H6J7 331 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 A4GNTQ9UNA3 340 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 PCYT1BQ9Y5K3 369 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 KPNA3O00505 521 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 PPM1BO75688 479 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 EIF4EP06730 217 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 GBX2P52951 348 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 VSX2P58304 361 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 CRYZQ08257 329 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 SRFBP1Q8NEF9 429 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 BEST4Q8NFU0 473 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 OR4F15Q8NGB8 312 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 OR5AR1Q8NGP9 310 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 LMLNQ96KR4 655 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 ZNF578Q96N58 590 aaPredicted RBP22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 MACROD1Q9BQ69 325 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 OSGEPL1Q9H4B0 414 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 ACAD8Q9UKU7 415 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 NUBP2Q9Y5Y2 271 aa22.52■■□□□ 1.2
CSNK1E-203ENST00000396832 GPR171O14626 319 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 KHNYNO15037 678 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 SLC6A11P48066 632 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 KCNJ5P48544 419 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 CD300LDQ6UXZ3 194 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 METTL3Q86U44 580 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 LRRC28Q86X40 367 aaPredicted RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 VN1R2Q8NFZ6 395 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 OR6T1Q8NGN1 323 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 OR8K5Q8NH50 307 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 TAC3Q9UHF0 121 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 ZFR2Q9UPR6 939 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 ASF1AQ9Y294 204 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 H3BUI4 141 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 GAAP10253 952 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 NR2F1P10589 423 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 RPL3P39023 403 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 PITPNBP48739 271 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 ZNF155Q12901 538 aaPredicted RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 ZNF791Q3KP31 576 aaPredicted RBP22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 DLL4Q9NR61 685 aa22.51■■□□□ 1.19
CSNK1E-203ENST00000396832 FOXE1O00358 373 aaPredicted RBP22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 TOXO94900 526 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 TYRP14679 529 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 HTRA3P83110 453 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 KIAA1211LQ6NV74 962 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 SLC9B2Q86UD5 537 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 SAMD12Q8N8I0 201 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 OR9A1PQ8NGU1 263 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 POF1BQ8WVV4 589 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 LINC00052Q96N35 136 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 LYARQ9NX58 379 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 RNF215Q9Y6U7 377 aa22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 MTCL1Q9Y4B5 1905 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-203ENST00000396832 GSAPA4D1B5 854 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms