RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 OLIG3Q7RTU3 272 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MRGPRGQ86SM5 289 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 YRDCQ86U90 279 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 PACS2Q86VP3 889 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 GOLGA6L1Q8N7Z2 621 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 WDSUB1Q8N9V3 476 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR1J4Q8NGS1 313 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ITLN2Q8WWU7 325 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5P2Q8WZ92 322 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 CDS1Q92903 461 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 NTNG2Q96CW9 530 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 COQ8BQ96D53 544 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TMCO6Q96DC7 493 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 CHMP6Q96FZ7 201 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 TMEM41AQ96HV5 264 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 MS4A4EQ96PG1 132 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR52B2Q96RD2 323 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 SECISBP2Q96T21 854 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 DPY30Q9C005 99 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 BHLHE41Q9C0J9 482 aaPredicted RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 UBQLN3Q9H347 655 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 Q9N2J8 555 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ATAD3AQ9NVI7 634 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 AIG1Q9NVV5 245 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 ALKBH4Q9NXW9 302 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 SUCOQ9UBS9 1254 aaKnown RBP7□□□□□ -1.29
HMGB3P1-201ENST00000393368 B4GALT7Q9UBV7 327 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 FBXL2Q9UKC9 423 aa7□□□□□ -1.29
HMGB3P1-201ENST00000393368 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NPIPA5A0A0B4J1W7 369 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 A0A1B0GVC2 190 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NPIPA7E9PJI5 369 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 AQP7O14520 342 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 DIAPH2O60879 1101 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 KCNK2O95069 426 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NKX2-2O95096 273 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 SNUPNO95149 360 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 SNX4O95219 450 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 CPSF4O95639 269 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 IL33O95760 270 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 HMGN2P05204 90 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 HPNP05981 417 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NPIPA8P0DM63 369 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GRNP28799 593 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 RPL3P39023 403 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAP3K8P41279 467 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 CCT3P49368 545 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 DGKQP52824 942 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GAS1P54826 345 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 C21orf58P58505 322 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 PPP2R2AP63151 447 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 EFR3AQ14156 821 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 MLC1Q15049 377 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 DECR1Q16698 335 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 SMU1Q2TAY7 513 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GRAMD1BQ3KR37 738 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM174BQ3ZCQ3 159 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GXYLT1Q4G148 440 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF787Q6DD87 383 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC30A6Q6NXT4 461 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 PAOXQ6QHF9 649 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 APOOLQ6UXV4 268 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAMDC2Q7Z304 686 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 MARCH3Q86UD3 253 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 TRIM42Q8IWZ5 723 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 CDRT4Q8N9R6 151 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GATSQ8NAP1 163 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM83FQ8NEG4 500 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5D16Q8NGK9 328 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR4A15Q8NGL6 344 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5M1Q8NGP8 315 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NEIL3Q8TAT5 605 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 RAB3IL1Q8TBN0 382 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 PIWIL2Q8TC59 973 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 LRRC8CQ8TDW0 803 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 RNF138Q8WVD3 245 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 DYDC1Q8WWB3 177 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 HOXB13Q92826 284 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 THOC1Q96FV9 657 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRPF18Q99633 342 aaKnown RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 EBF4Q9BQW3 602 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 SERHL2Q9H4I8 314 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 VIPAS39Q9H9C1 493 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 C3orf14Q9HBI5 128 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GPATCH2Q9NW75 528 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 GIN1Q9NXP7 522 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 NTMQ9P121 344 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACAD8Q9UKU7 415 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 RPH3AQ9Y2J0 694 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM215AQ9Y5M1 114 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 WIF1Q9Y5W5 379 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 KCNE3Q9Y6H6 103 aa6.99□□□□□ -1.29
HMGB3P1-201ENST00000393368 USP9YO00507 2555 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 RNF103-CHMP3A0A140T963 221 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 TRPC5OSA6NMA1 111 aa6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 HMGB1P1B2RPK0 211 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P1-201ENST00000393368 SHISA8B8ZZ34 492 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms