RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 OR1L3Q8NH93 324 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 HOXB13Q92826 284 aaPredicted RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 SLC41A2Q96JW4 573 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 UCK2Q9BZX2 261 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 CACYBPQ9HB71 228 aaKnown RBP18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 SCN3BQ9NY72 215 aa18.47■□□□□ 0.55
PDLIM5-205ENST00000380180 HYAL3O43820 417 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 TRHRP34981 398 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 KRT20P35900 424 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 OR1D4P47884 311 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 RGS8P57771 180 aaPredicted RBP18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 HLA-BQ31612 363 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 TMEM236Q5W0B7 351 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 RHOXF1Q8NHV9 184 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 SAP25Q8TEE9 199 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 DUSP23Q9BVJ7 150 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 DUSP21Q9H596 190 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 VCX3AQ9NNX9 186 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 ENAMQ9NRM1 1142 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 DHCR7Q9UBM7 475 aaKnown RBP18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 FTSJ1Q9UET6 329 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 RSL24D1Q9UHA3 163 aaKnown RBP18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 NDOR1Q9UHB4 597 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 KCNE5Q9UJ90 142 aa18.46■□□□□ 0.55
PDLIM5-205ENST00000380180 MUC3AQ02505 3323 aa18.46■□□□□ 0.54
PDLIM5-205ENST00000380180 ASCC3Q8N3C0 2202 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 CPSF4LA6NMK7 179 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF749O43361 778 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 AK1P00568 194 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 THBS1P07996 1170 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 CCNYL3P0C7X3 344 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 OSMP13725 252 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 STT3AP46977 705 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 UGT2B15P54855 530 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 EEF1A1P68104 462 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 SLC35A2P78381 396 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 LSM11P83369 360 aaKnown RBP eCLIP18.45■□□□□ 0.541e-7■■■■■ 32.8
PDLIM5-205ENST00000380180 PSG6Q00889 435 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF267Q14586 743 aaPredicted RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZC3H14Q6PJT7 736 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 PRSS42Q7Z5A4 293 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 C11orf74Q86VG3 221 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 C1orf210Q8IVY1 113 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 MORN4Q8NDC4 146 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 OR4K5Q8NGD3 323 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 EDAQ92838 391 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 RHNO1Q9BSD3 238 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 YIPF2Q9BWQ6 316 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 DGCR6LQ9BY27 220 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 CCDC90BQ9GZT6 254 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 FOLH1BQ9HBA9 442 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NECTIN3Q9NQS3 549 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 SEMA4GQ9NTN9 838 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ERVK-18Q9QC07 812 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 SNX5Q9Y5X3 404 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NPIPA5A0A0B4J1W7 369 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZAR1LA6NP61 321 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NPIPA7E9PJI5 369 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 PEX12O00623 359 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 FAM20BO75063 409 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 CYP7B1O75881 506 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NPIPA8P0DM63 369 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 RPS4Y1P22090 263 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 POU1F1P28069 291 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ENTPD8Q5MY95 495 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 CLVS1Q8IUQ0 354 aaPredicted RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF540Q8NDQ6 660 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NR4A3Q92570 626 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 DIO2Q92813 273 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 TUBA1CQ9BQE3 449 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 LMF2Q9BU23 707 aaKnown RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 ZNF226Q9NYT6 803 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NTNG1Q9Y2I2 539 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 HEMK1Q9Y5R4 338 aaPredicted RBP18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 COMMD3-BMI1R4GMX3 469 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 SPEGQ15772 3267 aa18.45■□□□□ 0.54
PDLIM5-205ENST00000380180 NUP210LQ5VU65 1888 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 AP3D1O14617 1153 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 KIAA0513O60268 411 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 BRINP1O60477 761 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 KCNK2O95069 426 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 DBIP07108 87 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 TTKP33981 857 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ILKQ13418 452 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 ZER1Q7Z7L7 766 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 KMT5CQ86Y97 462 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 P3H2Q8IVL5 708 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 CCDC103Q8IW40 242 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 GPR135Q8IZ08 494 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 DEPDC4Q8N2C3 294 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 LINC00471Q8N535 108 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 OR4C6Q8NH72 309 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 NECAB3Q96P71 396 aaPredicted RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 MCHR1Q99705 422 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 POLR2J3Q9H1A7 115 aaKnown RBP18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 LANCL2Q9NS86 450 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 SLC6A14Q9UN76 642 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 CPED1A4D0V7 1026 aa18.44■□□□□ 0.54
PDLIM5-205ENST00000380180 SOX30O94993 753 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms