RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SLC7A7Q9UM01 511 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ARAFP10398 606 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PRKACBP22694 351 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 DUSP7Q16829 419 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PODNL1Q6PEZ8 512 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR5K2Q8NHB8 316 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CREB3L4Q8TEY5 395 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SLC39A7Q92504 469 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CFHR5Q9BXR6 569 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NEDD8-MDP1E9PL57 170 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MBOAT2Q6ZWT7 520 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MAMDC2Q7Z304 686 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SZRD1Q7Z422 152 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CDC26Q8NHZ8 85 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 HS3ST3A1Q9Y663 406 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 DRD1P21728 446 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GNALP38405 381 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MTPNP58546 118 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 C9orf131Q5VYM1 1079 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SLC2A7Q6PXP3 512 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SLCO4C1Q6ZQN7 724 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 THAP4Q8WY91 577 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CSRP3P50461 194 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 DBPQ10586 325 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 C10orf53Q8N6V4 93 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF717Q9BY31 904 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 HNF1BP35680 557 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FEN1P39748 380 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 HIST2H3AQ71DI3 136 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GRAMD2AQ8IUY3 354 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SLC25A19Q9HC21 320 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TPT1P13693 172 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RAB5BP61020 215 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 INAVAQ3KP66 663 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RAET1GQ6H3X3 334 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 KMT5CQ86Y97 462 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ATP6V1C2Q8NEY4 427 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 MRPS7Q9Y2R9 242 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GPR75O95800 540 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 PYROXD2Q8N2H3 581 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FAM98AQ8NCA5 519 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 OR1J2Q8NGS2 313 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TAPBPLQ9BX59 468 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CHRNA10Q9GZZ6 450 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SDHAF2Q9NX18 166 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 NTMQ9P121 344 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CFAP97Q9P2B7 532 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 PROS1P07225 676 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CDH15P55291 814 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SEC61A1P61619 476 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ENPP2Q13822 863 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SLC25A31Q9H0C2 315 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF598Q86UK7 904 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF676Q8N7Q3 588 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SCAMP5Q8TAC9 235 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 DDIT4LQ96D03 193 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SOX10P56693 466 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TCEANCQ8N8B7 351 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ACER3Q9NUN7 267 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TOX3O15405 576 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ITGB1P05556 798 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RABGGTBP53611 331 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 AMIGO1Q86WK6 493 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 HASPINQ8TF76 798 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FCRL4Q96PJ5 515 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RGCCQ9H4X1 137 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 BCO1Q9HAY6 547 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 DUS2Q9NX74 493 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RNF11Q9Y3C5 154 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 PLPP2O43688 288 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FOXK2Q01167 660 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GFOD2Q3B7J2 385 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF776Q68DI1 518 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM173Q86WV6 379 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ZC3H10Q96K80 434 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 RNF38Q9H0F5 515 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 TRIM77I1YAP6 450 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FKTNO75072 461 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FLI1Q01543 452 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 GRM7Q14831 915 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FAM124AQ86V42 546 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FRKP42685 505 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 NAAAQ02083 359 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 CMTM8Q8IZV2 173 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 P2RY13Q9BPV8 354 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SRPK3Q9UPE1 567 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SEMG1P04279 462 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 S100A11P31949 105 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 FBXL4Q9UKA2 621 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ELOA3DA6NLF2 546 aaPredicted RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 SDC3O75056 442 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 AQP8O94778 261 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 IFNA4P05014 189 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 APEX1P27695 318 aaKnown RBP4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ELOA3BQ3SY89 546 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 LNX2Q8N448 690 aa4.66□□□□□ -1.66
PCDH9-201ENST00000377861 ELOA3Q8NG57 546 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms