RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 C2orf92A0A1B0GVN3 265 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 A0A1W2PPC4 97 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 A8MVJ9 347 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 CCR5P51681 352 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 DLX2Q07687 328 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-202ENST00000377797 MESP2Q0VG99 397 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 QPRTQ15274 297 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 NAT6Q93015 286 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TRPV4Q9HBA0 871 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 MALT1Q9UDY8 824 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 NPIPA5E9PKD4 350 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TP53I11O14683 189 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 PROM1O43490 865 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 RNF13O43567 381 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 PGCP20142 388 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 CASRP41180 1078 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TSFMP43897 325 aaKnown RBP13.62□□□□□ -0.23
TCOF1-202ENST00000377797 RAB38P57729 211 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TUBA1BP68363 451 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 MAP4K2Q12851 820 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 HMBOX1Q6NT76 420 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TUBA1AQ71U36 451 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 EDAQ92838 391 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TCF7L1Q9HCS4 588 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 A6NHS1 94 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 CLCA1A8K7I4 914 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 AGAP14A8MT82 685 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
TCOF1-202ENST00000377797 CLPXO76031 633 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 EMP2P54851 167 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 DPH1Q9BZG8 443 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 HOXD1Q9GZZ0 328 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 BRD7Q9NPI1 651 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 LCTP09848 1927 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 A0A1B0GTW7 788 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 FAM240BA0A1B0GVZ2 78 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 FABP12A6NFH5 140 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TSC22D2O75157 780 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 CDRT1O95170 752 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 PRKAR1AP10644 381 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 ATP12AP54707 1039 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 ELOAQ14241 798 aaKnown RBP13.62□□□□□ -0.23
TCOF1-202ENST00000377797 LIPKQ5VXJ0 399 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 PLET1Q6UQ28 207 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF547Q8IVP9 402 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 SYNPOQ8N3V7 929 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 RHBDD1Q8TEB9 315 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 THEM6Q8WUY1 208 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 ZFPM2Q8WW38 1151 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 FKBP10Q96AY3 582 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 FUNDC2Q9BWH2 189 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 WASH6PQ9NQA3 447 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 TMPRSS11EQ9UL52 423 aa13.62□□□□□ -0.23
TCOF1-202ENST00000377797 GXYLT2A0PJZ3 443 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 PLD2O14939 933 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 CDC40O60508 579 aaKnown RBP eCLIP13.61□□□□□ -0.239e-7■■■□□ 18.5
TCOF1-202ENST00000377797 ADORA3P0DMS8 318 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 EDNRAP25101 427 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 MAD2L1BPQ15013 274 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 PODNL1Q6PEZ8 512 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 OLIG3Q7RTU3 272 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 PRSS48Q7RTY5 328 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 DEFB123Q8N688 67 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 OR51Q1Q8NH59 317 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ITFG2Q969R8 447 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SAMD8Q96LT4 415 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 A0A1W2PR48 441 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SMIM30A4D0T7 59 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SERPINA3P01011 423 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 HBQ1P09105 142 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 STAT5AP42229 794 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SGCBQ16585 318 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 NKAIN2Q5VXU1 208 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 DNM1P34Q6PK57 102 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 TP53I13Q8NBR0 393 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 LGALS12Q96DT0 336 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ELP4Q96EB1 424 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 TMEM38AQ9H6F2 299 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 DHCR7Q9UBM7 475 aaKnown RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 EBF1Q9UH73 591 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 MAGEB3O15480 346 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 MT-ND5P03915 603 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 CD22P20273 847 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 GGT2P36268 569 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 GNALP38405 381 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 MTNR1AP48039 350 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 DNASE1L1P49184 302 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ARFIP1P53367 373 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 YBX1P67809 324 aaKnown RBP13.61□□□□□ -0.23
TCOF1-202ENST00000377797 NR0B2Q15466 257 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF367Q7RTV3 350 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 ZNF595Q8IYB9 648 aa13.61□□□□□ -0.23
TCOF1-202ENST00000377797 EID2Q8N6I1 236 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms