RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ALG14Q96F25 216 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 PITHD1Q9GZP4 211 aaPredicted RBP16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 C7orf72A4D263 438 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 C2CD4DB7Z1M9 353 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 SERPINA3P01011 423 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 OSMP13725 252 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 AFF3P51826 1226 aaKnown RBP16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 ELOAQ14241 798 aaKnown RBP16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 GAS6Q14393 721 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF304Q9HCX3 659 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 SERGEFQ9UGK8 458 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 CNOT11Q9UKZ1 510 aaKnown RBP16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 FKBP7Q9Y680 259 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 SVILO95425 2214 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 TARM1B6A8C7 271 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 H0YJX3 145 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF195O14628 629 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 HOXC12P31275 282 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 NUDT1P36639 197 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 DPTQ07507 201 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 CDK5R2Q13319 367 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 KLBQ86Z14 1044 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 TMCO6Q96DC7 493 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 HDHD5Q9BXW7 423 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 ANKRD60Q9BZ19 345 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 PLA2G2FQ9BZM2 168 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
PTPDC1-202ENST00000375360 PPM1BO75688 479 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 GSTM2P28161 218 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF791Q3KP31 576 aaPredicted RBP16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 XKR7Q5GH72 579 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 TMEM184AQ6ZMB5 413 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 IGFN1Q86VF2 1251 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 SNX29P2Q8IUI4 249 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 FAM217AQ8IXS0 508 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 MFSD9Q8NBP5 474 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 DENND6BQ8NEG7 585 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 EDAQ92838 391 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 TM4SF18Q96CE8 201 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 TET1Q8NFU7 2136 aa16.89■□□□□ 0.3
PTPDC1-202ENST00000375360 TRPM6Q9BX84 2022 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 TAF4O00268 1085 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ITGA10O75578 1167 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 OXSR1O95747 527 aaPredicted RBP16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 MTNR1AP48039 350 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 DCST2Q5T1A1 773 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 P4HA3Q7Z4N8 544 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 CPOQ8IVL8 374 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ACBD7Q8N6N7 88 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 NLGN4YQ8NFZ3 816 aaPredicted RBP16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 TFAP2CQ92754 450 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 HS6ST2Q96MM7 605 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 SPAG17Q6Q759 2223 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ARL6IP5O75915 188 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 WDR20Q8TBZ3 569 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 GLIPR2Q9H4G4 154 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF696Q9H7X3 374 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 TIGARQ9NQ88 270 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 FGF21Q9NSA1 209 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ACSS1Q9NUB1 689 aaPredicted RBP16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 RLIMQ9NVW2 624 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 STOML2Q9UJZ1 356 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 TRBV5-4A0A0C4DH59 114 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 FAM227AF5H4B4 570 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 KCNK5O95279 499 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 CSN2P05814 226 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 KCNJ5P48544 419 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 CTXN1P60606 82 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 TSPAN5P62079 268 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 GPR19Q15760 415 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ABHD17CQ6PCB6 329 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 KLHL31Q9H511 634 aa16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 RPH3AQ9Y2J0 694 aaPredicted RBP16.89■□□□□ 0.29
PTPDC1-202ENST00000375360 ACOT8O14734 319 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 HTR1AP08908 422 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PABPC4LP0CB38 370 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF20P17024 532 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PRKCAP17252 672 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 OR2B6P58173 313 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 SMAD2Q15796 467 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PIP5KL1Q5T9C9 394 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 C19orf47Q8N9M1 422 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 FUNDC2Q9BWH2 189 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 CUTCQ9NTM9 273 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PPT2Q9UMR5 302 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PTRH2Q9Y3E5 179 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 A0A1W2PPL8 197 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ARAFP10398 606 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ITGA3P26006 1051 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 SFTPDP35247 375 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 SMN1Q16637 294 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 C22orf42Q6IC83 251 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 FAM86B1Q8N7N1 296 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 OR5T3Q8NGG3 340 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ADAMTS18Q8TE60 1221 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ZFP90Q8TF47 636 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms