RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MAS1P04201 325 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 RNH1P13489 461 aaKnown RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 CASP3P42574 277 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 VAMP2P63027 116 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 C17orf99Q6UX52 265 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 LIPIQ6XZB0 460 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 SLC9B2Q86UD5 537 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 OR6N1Q8NGY5 312 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 LKAAEAR1Q8TD35 194 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ASB12Q8WXK4 309 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 C7orf34Q96L11 122 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 DDX31Q9H8H2 851 aaKnown RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 EPHA6Q9UF33 1036 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 LTBP4Q8N2S1 1624 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 HYKKA2RU49 373 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF208O43345 1280 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 RFPL3O75679 317 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 SNTA1Q13424 505 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 XKR7Q5GH72 579 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 HES5Q5TA89 166 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ARHGAP40Q5TG30 622 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 OR2G6Q5TZ20 316 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 LINC00299Q6ZSB3 139 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ELMOD3Q96FG2 381 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 CMKLR1Q99788 373 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 GON7Q9BXV9 100 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 KLRF1Q9NZS2 232 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 POU2F3Q9UKI9 436 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 HPGDSO60760 199 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 NDUFB2O95178 105 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 VNN2O95498 520 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 PRKXP51817 358 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ISL1P61371 349 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 TAP2Q03519 686 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 SYPL1Q16563 259 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 DUS1LQ6P1R4 473 aaKnown RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 FAM198BQ6UWH4 519 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 WASH2PQ6VEQ5 465 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM173Q86WV6 379 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 CSNK1A1LQ8N752 337 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 TOR1AIP2Q8NFQ8 470 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 OR2T4Q8NH00 348 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 OR5W2Q8NH69 310 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 LILRB4Q8NHJ6 448 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 DNAJA3Q96EY1 480 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF559Q9BR84 538 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 OR51J1Q9H342 316 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 NT5DC2Q9H857 520 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 TEX10Q9NXF1 929 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 SLC7A7Q9UM01 511 aa10.9□□□□□ -0.66
PTCH1-203ENST00000375274 AK6Q9Y3D8 172 aaKnown RBP10.9□□□□□ -0.66
PTCH1-203ENST00000375274 H0YIV9 168 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 CSNK1DP48730 415 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 PTH2RP49190 550 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 ELOAQ14241 798 aaKnown RBP10.9□□□□□ -0.67
PTCH1-203ENST00000375274 TCEAL6Q6IPX3 200 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 DLEU7Q6UYE1 221 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 ENTHD1Q8IYW4 607 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 C7orf61Q8IZ16 206 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 SLCO4A1Q96BD0 722 aa10.9□□□□□ -0.67
PTCH1-203ENST00000375274 ZMYND19Q96E35 227 aaPredicted RBP10.9□□□□□ -0.67
PTCH1-203ENST00000375274 TJP1Q07157 1748 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 MYO7AQ13402 2215 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 A0A1B0GVC2 190 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 A6NIN4 97 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 PPP1R3DO95685 299 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CSF2RAP15509 400 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 GPX2P18283 190 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 HTR2AP28223 471 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 RBMXP38159 391 aaKnown RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 HOXC5Q00444 222 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 RNASE10Q5GAN6 216 aaKnown RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 L3MBTL4Q8NA19 623 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 MS4A4EQ96PG1 132 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TREX2Q9BQ50 279 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 FAM183AA6NL82 134 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 HNRNPA1P09651 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 PTGER1P34995 402 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 METTL11BQ5VVY1 283 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CCSAPQ6IQ19 270 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CPXM2Q8N436 756 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 OR9A2Q8NGT5 310 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ADAMTS16Q8TE57 1224 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TCEAL4Q96EI5 215 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 UHRF1Q96T88 793 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 SLC6A7Q99884 636 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 MAFFQ9ULX9 164 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 RASD1Q9Y272 281 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 NUBP2Q9Y5Y2 271 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 GASTP01350 101 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CD3GP09693 182 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CCL5P13501 91 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 VIPR2P41587 438 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 SHC2P98077 582 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CDNFQ49AH0 187 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms