RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RAD18Q9NS91 495 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 COA4Q9NYJ1 87 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 LRWD1Q9UFC0 647 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.05
UBR4-201ENST00000375218 MYLKQ15746 1914 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 SPATA31C2B4DYI2 1134 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 CEBPBP17676 345 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 KDELR2P33947 212 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 MPLP40238 635 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 ETV4P43268 484 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 MRPL19P49406 292 aaKnown RBP8.46□□□□□ -1.06
UBR4-201ENST00000375218 MAPK12P53778 367 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 CACNA2D1P54289 1103 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 TXNL4AP83876 142 aaKnown RBP8.46□□□□□ -1.06
UBR4-201ENST00000375218 PRRT3Q5FWE3 981 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 TEX38Q6PEX7 206 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 YTHDF3Q7Z739 585 aaKnown RBP8.46□□□□□ -1.06
UBR4-201ENST00000375218 SERPINA9Q86WD7 417 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 FAM71AQ8IYT1 594 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 PCDHB18PQ96TA0 734 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 C20orf24Q9BUV8 137 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 MYOZ1Q9NP98 299 aaPredicted RBP8.46□□□□□ -1.06
UBR4-201ENST00000375218 PRDM6Q9NQX0 595 aa8.46□□□□□ -1.06
UBR4-201ENST00000375218 ANKRD30BLA7E2S9 258 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 C9JVG2 144 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NKX2-2O95096 273 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 IFNA5P01569 189 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NTSR1P30989 418 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 YWHAGP61981 247 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBR4-201ENST00000375218 MAN2A1Q16706 1144 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 XKR7Q5GH72 579 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CERCAMQ5T4B2 595 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CFAP77Q6ZQR2 320 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 SFR1Q86XK3 245 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NRGNQ92686 78 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 STMN2Q93045 179 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 SLC35C1Q96A29 364 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ZNF775Q96BV0 537 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 C3orf30Q96M34 536 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 TMED9Q9BVK6 235 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 MND1Q9BWT6 205 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ABHD10Q9NUJ1 306 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 PLK2Q9NYY3 685 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NLGN3Q9NZ94 848 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 BTNL2Q9UIR0 455 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ICKQ9UPZ9 632 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 PCDHB7Q9Y5E2 793 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 WIPF3A6NGB9 483 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 RAD51CO43502 376 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NUAK1O60285 661 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 MFAP3LO75121 409 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CSO75390 466 aaKnown RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 ITGA10O75578 1167 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NADKO95544 446 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 GIFP27352 417 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 THBS4P35443 961 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 PTDSS1P48651 473 aaKnown RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 FAM35AQ86V20 835 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 Q8N9G6 341 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 FAM83FQ8NEG4 500 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 GRPEL2Q8TAA5 225 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 SPSB1Q96BD6 273 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 INPP5KQ9BT40 448 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 KRCC1Q9NPI7 259 aaPredicted RBP8.45□□□□□ -1.06
UBR4-201ENST00000375218 ZNF639Q9UID6 485 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 EMSYQ7Z589 1322 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 A8MU76 341 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 M0QYT0 321 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 UPK3AO75631 287 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 PMCHP20382 165 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ADRA1AP35348 466 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CXCR3P49682 368 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 POU4F1Q01851 419 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 AQP6Q13520 282 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 NIPAL1Q6NVV3 410 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 CPXM2Q8N436 756 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 MREGQ8N565 214 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 KREMEN2Q8NCW0 462 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ST8SIA1Q92185 356 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 TMEM80Q96HE8 168 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ZFP69BQ9UJL9 534 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 ACTL7AQ9Y615 435 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 BSNQ9UPA5 3926 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 TGOLN2O43493 480 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 HS6ST1O60243 411 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 UTS2O95399 124 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 FBP1P09467 338 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 LYL1P12980 280 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 PRDX2P32119 198 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 RGRP47804 291 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 MPPED2Q15777 294 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 SLC35F6Q8N357 371 aa8.45□□□□□ -1.06
UBR4-201ENST00000375218 RNF148Q8N7C7 305 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms