RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SLAMF1Q13291 335 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 CDK5R2Q13319 367 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 KEAP1Q14145 624 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 WDR45BQ5MNZ6 344 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 ATAD3CQ5T2N8 411 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 ASPGQ86U10 573 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 ELMOD3Q96FG2 381 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 BRF2Q9HAW0 419 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 TIMM8BQ9Y5J9 83 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 ANKRD12Q6UB98 2062 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 SSC5DA1L4H1 1573 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 BPTFQ12830 3046 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 OR6C74A6NCV1 312 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 DIRAS3O95661 229 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 C6P13671 934 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 DRD2P14416 443 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 NR4A2P43354 598 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 PITPNBP48739 271 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 MS4A2Q01362 244 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF791Q3KP31 576 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 PRRT3Q5FWE3 981 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 MLIPQ5VWP3 458 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 LRRC25Q8N386 305 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 TOR1AIP2Q8NFQ8 470 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 OR52N2Q8NGI0 321 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 FKBP10Q96AY3 582 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 WDR92Q96MX6 357 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 YARS2Q9Y2Z4 477 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 PCDHGA8Q9Y5G5 932 aa11.64□□□□□ -0.55
NPLOC4-202ENST00000374747 A0A1W2PQU0 124 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 VSTM5A8MXK1 200 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 RFPL3O75679 317 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 TRAPPC6AO75865 159 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ETFAP13804 333 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM107Q6UX40 140 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 GATSQ8NAP1 163 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CHST14Q8NCH0 376 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 OR4K5Q8NGD3 323 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 SULT4A1Q9BR01 284 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ARNT2Q9HBZ2 717 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 FZD3Q9NPG1 666 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 INTS6Q9UL03 887 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 NUBP2Q9Y5Y2 271 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ENPP4Q9Y6X5 453 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 TCRBV21S2A2A0A5A6 115 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 KCNJ13O60928 360 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CLEC3AO75596 197 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 TFP02787 698 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 IFNA4P05014 189 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CDK2P24941 298 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 GRPRP30550 384 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CSNK1DP48730 415 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 APOFQ13790 326 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CHPT1Q8WUD6 406 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 IL17CQ9P0M4 197 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 PCTPQ9UKL6 214 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 SPO11Q9Y5K1 396 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF860A6NHJ4 632 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 HHLA1C9JL84 531 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ARPC5O15511 151 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ADORA3P0DMS8 318 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 HOXD12P35452 270 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 DCTP40126 519 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF84P51523 738 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 WNT4P56705 351 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 MCCD1P59942 119 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 PLP2Q04941 152 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ASF1BQ9NVP2 202 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 PRAF2O60831 178 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 IFNA10P01566 189 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 HRGP04196 525 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 POLR2CP19387 275 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ETV4P43268 484 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 PGGT1BP53609 377 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CYCSP99999 105 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 HMGN2P46Q86SG4 172 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CNTNAP3BQ96NU0 1288 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 RTP3Q9BQQ7 232 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 CPEB1Q9BZB8 566 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF334Q9HCZ1 680 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 ZFP57Q9NU63 452 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 COQ3Q9NZJ6 369 aa11.63□□□□□ -0.55
NPLOC4-202ENST00000374747 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 CPED1A4D0V7 1026 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 A6NJ64 397 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SSX4O60224 188 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 IFNA17P01571 189 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PRKACAP17612 351 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 MICAQ29983 383 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PLBD1Q6P4A8 553 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms