RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PTGER1P34995 402 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 BUD31P41223 144 aaPredicted RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 ANXA11P50995 505 aaKnown RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 SH3BGRP55822 239 aaPredicted RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 TGIF1Q15583 401 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 EXOC3L2Q2M3D2 409 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 TMEM107Q6UX40 140 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 TSPYL5Q86VY4 417 aaPredicted RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 ESX1Q8N693 406 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 CNIH3Q8TBE1 160 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 APOBEC4Q8WW27 367 aaKnown RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 PROX1Q92786 737 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 FGF11Q92914 225 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 NKD1Q969G9 470 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 ZNF566Q969W8 418 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 COL26A1Q96A83 441 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 ZNF681Q96N22 645 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 SERINC2Q96SA4 455 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 FEVQ99581 238 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 TREX2Q9BQ50 279 aaPredicted RBP14.94□□□□□ -0.02
C9orf78-201ENST00000372447 GABARAPL3Q9BY60 117 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 VCX3AQ9NNX9 186 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 ACER3Q9NUN7 267 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 FER1L5A0AVI2 2057 aa14.94□□□□□ -0.02
C9orf78-201ENST00000372447 A0A1W2PS29 197 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 A8MVJ9 347 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 E9PQ18 207 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SLC1A7O00341 560 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 RDH16O75452 317 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SERPINB7O75635 380 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ONECUT2O95948 504 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 FHP07954 510 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 CCDC159P0C7I6 412 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 NR2F1P10589 423 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ANXA8P13928 327 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 EPHA2P29317 976 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 LIMS1P48059 325 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 HMGA2P52926 109 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 PRR5P85299 388 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 MAT1AQ00266 395 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 TNFRSF17Q02223 184 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 LSAMPQ13449 338 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 RAB39AQ14964 217 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SYT16Q17RD7 645 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 COX15Q7KZN9 410 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 LGI4Q8N135 537 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SLC5A8Q8N695 610 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 GPR32P1Q8NGA4 272 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 OR5T3Q8NGG3 340 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 PITX2Q99697 317 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 TUBA1CQ9BQE3 449 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 CCDC86Q9H6F5 360 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 PHF11Q9UIL8 331 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 C1QTNF9BB2RNN3 333 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 EMC8O43402 210 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 TLX3O43711 291 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 GADD45GO95257 159 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ANGPTL1O95841 491 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 HMGN2P05204 90 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 C1QTNF9P0C862 333 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 LIPCP11150 499 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 JUNBP17275 347 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ZNF10P21506 573 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 CPN2P22792 545 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 KCNJ5P48544 419 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 RPP38P78345 283 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 OLR1P78380 273 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 DSG2Q14126 1118 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 GANABQ14697 944 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 LASP1Q14847 261 aaKnown RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 NEDD8Q15843 81 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ARHGAP40Q5TG30 622 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 NIPAL1Q6NVV3 410 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 CLVS1Q8IUQ0 354 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 BPIFB6Q8NFQ5 453 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 OR9A2Q8NGT5 310 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 MIPOL1Q8TD10 442 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ZFAND2BQ8WV99 257 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SGCDQ92629 289 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ZNF354BQ96LW1 612 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 COL21A1Q96P44 957 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 RSPO3Q9BXY4 272 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 CXorf21Q9HAI6 301 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 KCMF1Q9P0J7 381 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 SEC14L3Q9UDX4 400 aa14.93□□□□□ -0.02
C9orf78-201ENST00000372447 GPC6Q9Y625 555 aaPredicted RBP14.93□□□□□ -0.02
C9orf78-201ENST00000372447 ZFHX4Q86UP3 3567 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 B3GALT2O43825 422 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 TCN2P20062 427 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 FBLP22087 321 aaKnown RBP14.92□□□□□ -0.02
C9orf78-201ENST00000372447 STAT5AP42229 794 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 CRISP3P54108 245 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 LIM2P55344 173 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 RUNX2Q13950 521 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 MLIPQ5VWP3 458 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 KRT73Q86Y46 540 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 SPARTQ8N0X7 666 aa14.92□□□□□ -0.02
C9orf78-201ENST00000372447 BBS10Q8TAM1 723 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms