RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RCBTB2O95199 551 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 IL33O95760 270 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 TMIGD3P0DMS9 266 aaPredicted RBP17.16■□□□□ 0.34
TMEM53-201ENST00000372235 PRPS2P11908 318 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 LCN1P31025 176 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 MANFP55145 182 aaKnown RBP17.16■□□□□ 0.34
TMEM53-201ENST00000372235 SORDQ00796 357 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 KANK2Q63ZY3 851 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 DESI1Q6ICB0 168 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 ZCCHC12Q6PEW1 402 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 CDRT4Q8N9R6 151 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 FCRL1Q96LA6 429 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 PPP3R2Q96LZ3 170 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 SH3GL2Q99962 352 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 PIGMQ9H3S5 423 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 ANKZF1Q9H8Y5 726 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 ITGB1BP2Q9UKP3 347 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 DNAJC15Q9Y5T4 150 aa17.16■□□□□ 0.34
TMEM53-201ENST00000372235 ABCA12Q86UK0 2595 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 HSPA4LO95757 839 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 PEPDP12955 493 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 ZNF136P52737 540 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 GAS1P54826 345 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 DIO3P55073 304 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 DLX5P56178 289 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 KRTAP10-9P60411 292 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 C17orf67Q0P5P2 114 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 GLYR1Q49A26 553 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-201ENST00000372235 FLYWCH1Q4VC44 716 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 FAM219BQ5XKK7 198 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 OR2A2Q6IF42 318 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 Q6ZSR9 355 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 DDIASQ8IXT1 998 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 RELL2Q8NC24 303 aaPredicted RBP17.15■□□□□ 0.34
TMEM53-201ENST00000372235 NAXEQ8NCW5 288 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 OR4N2Q8NGD1 307 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 NINJ1Q92982 152 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 TBL1XR1Q9BZK7 514 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 SH3BP4Q9P0V3 963 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 FBXL2Q9UKC9 423 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 TRAF6Q9Y4K3 522 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 ADGRG4Q8IZF6 3080 aa17.15■□□□□ 0.34
TMEM53-201ENST00000372235 LSM1O15116 133 aaKnown RBP17.14■□□□□ 0.33
TMEM53-201ENST00000372235 FADS1O60427 444 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 CRHP06850 196 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 CD1EP15812 388 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 ZNF708P17019 499 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 LHX2P50458 406 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 RPL38P63173 70 aaKnown RBP17.14■□□□□ 0.33
TMEM53-201ENST00000372235 PRR5P85299 388 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 SRYQ05066 204 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 HSPB3Q12988 150 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 DCST1Q5T197 706 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 SPNS3Q6ZMD2 512 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 ADGRE4PQ86SQ3 457 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 MEIOBQ8N635 442 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 FADS6Q8N9I5 356 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 TWIST2Q8WVJ9 160 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 EGLN2Q96KS0 407 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 FAM111AQ96PZ2 611 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 PRPF18Q99633 342 aaKnown RBP17.14■□□□□ 0.33
TMEM53-201ENST00000372235 TUBA1CQ9BQE3 449 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 PIGQQ9BRB3 760 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 ATAD3AQ9NVI7 634 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 DNAJB12Q9NXW2 375 aaKnown RBP17.14■□□□□ 0.33
TMEM53-201ENST00000372235 NTMQ9P121 344 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 FIS1Q9Y3D6 152 aa17.14■□□□□ 0.33
TMEM53-201ENST00000372235 INTS1Q8N201 2190 aaKnown RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 TUBAL3A6NHL2 446 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 SCO2O43819 266 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 LYPLA1O75608 230 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 CTAG2O75638 210 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 LINC00032P0C843 101 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 SDC1P18827 310 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 GABRA3P34903 492 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 HPCAL1P37235 193 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 FRKP42685 505 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 OCRLQ01968 901 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 PDE7AQ13946 482 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 FGFBP1Q14512 234 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 MLC1Q15049 377 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 RFTN2Q52LD8 501 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 ARL13AQ5H913 290 aaPredicted RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 GRAMD2AQ8IUY3 354 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 KIRREL3Q8IZU9 778 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 GPR151Q8TDV0 419 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 CAVIN3Q969G5 261 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 MS4A4EQ96PG1 132 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 POLDIP3Q9BY77 421 aaKnown RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 C12orf65Q9H3J6 166 aaKnown RBP17.13■□□□□ 0.33
TMEM53-201ENST00000372235 TNFRSF12AQ9NP84 129 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 JKAMPQ9P055 326 aa17.13■□□□□ 0.33
TMEM53-201ENST00000372235 FREM3P0C091 2139 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 CLCA1A8K7I4 914 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 EEF1E1-BLOC1S5C9J1V9 151 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 EEF1E1O43324 174 aaKnown RBP17.12■□□□□ 0.33
TMEM53-201ENST00000372235 ZIC3O60481 467 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 SNUPNO95149 360 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms