RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 NUP43Q8NFH3 380 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 OR5D16Q8NGK9 328 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CCL4L1Q8NHW4 92 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 TBC1D15Q8TC07 691 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 KCNE4Q8WWG9 221 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 JPH3Q8WXH2 748 aaPredicted RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 BORCS5Q969J3 196 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
LDB3-204ENST00000372066 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 ZFYVE21Q9BQ24 234 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 FUZQ9BT04 418 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 ACTRT3Q9BYD9 372 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 CPNE5Q9HCH3 593 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 GIN1Q9NXP7 522 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
LDB3-204ENST00000372066 A0A0J9YY10 115 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 GLOD5A6NK44 160 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CLDN24A6NM45 220 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 KLK10O43240 276 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PRKRAO75569 313 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 CLPXO76031 633 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 LGI1O95970 557 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 STATHP02808 62 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CHRM4P08173 479 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 IDH2P48735 452 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 BLKP51451 505 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 MAPK10P53779 464 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 UCNP55089 124 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 TMPRSS3P57727 454 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CFHR1Q03591 330 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 NR0B2Q15466 257 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CTF1Q16619 201 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SMN1Q16637 294 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 FCRL6Q6DN72 434 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 TMEM107Q6UX40 140 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CCDC81Q6ZN84 652 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 AVL9Q8NBF6 648 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 KCT2Q8NC54 265 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 Q96MT0 163 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 MACROD1Q9BQ69 325 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CLN6Q9NWW5 311 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ZNF226Q9NYT6 803 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 GCN1Q92616 2671 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 TP53BP1Q12888 1972 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SH3PXD2BA1X283 911 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 OR6C74A6NCV1 312 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 GASTP01350 101 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ALPPP05187 535 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 ZNF182P17025 639 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 CHMP24386 653 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PSMB9P28065 219 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 IFNA8P32881 189 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 SERPINB10P48595 397 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 MAN2A2P49641 1150 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PRKAG1P54619 331 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SNRPGP62308 76 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 FUT5Q11128 374 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 EIF2B5Q13144 721 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 C1orf61Q13536 156 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ZNF829Q3KNS6 432 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 GPAT3Q53EU6 434 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 C3orf38Q5JPI3 329 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SLX4IPQ5VYV7 408 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CDC73Q6P1J9 531 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 PCSK4Q6UW60 755 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 VANGL1Q8TAA9 524 aaPredicted RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 CSF3RQ99062 836 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CACYBPQ9HB71 228 aaKnown RBP13.15□□□□□ -0.3
LDB3-204ENST00000372066 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 CPNE7Q9UBL6 633 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 DAPP1Q9UN19 280 aa13.15□□□□□ -0.3
LDB3-204ENST00000372066 A4GNTQ9UNA3 340 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms