RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 HMGA2P52926 109 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 DHRSXQ8N5I4 330 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 LRFN5Q96NI6 719 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 KCND3Q9UK17 655 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 ZNF443Q9Y2A4 671 aaPredicted RBP24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 SPEGQ15772 3267 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 IDSB3KWA1 339 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 HS6ST1O60243 411 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 GDF9O60383 454 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 SNAP29O95721 258 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 DDAH2O95865 285 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 EPPINO95925 133 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 IGKV3-11P04433 115 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 KLK3P07288 261 aaPredicted RBP24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 CT45A8P0DMV1 189 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 CT45A9P0DMV2 189 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 PDK3Q15120 406 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 RFX4Q33E94 735 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 CT45A2Q5DJT8 189 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 DEF8Q6ZN54 512 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 G6PC3Q9BUM1 346 aa24.4■■□□□ 1.5
ATPAF1-202ENST00000371937 GADD45GO95257 159 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 RPS4Y1P22090 263 aaKnown RBP24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 RAD23AP54725 363 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 EIPR1Q53HC9 387 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 SHISA6Q6ZSJ9 500 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 COMTD1Q86VU5 262 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 PRSS33Q8NF86 280 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 OR4D11Q8NGI4 311 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 ZNF721Q8TF20 911 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 PHF10Q8WUB8 498 aaKnown RBP24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 CNBD2Q96M20 576 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 ITPAQ9BY32 194 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 ACER3Q9NUN7 267 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 C3orf18Q9UK00 162 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 GPR55Q9Y2T6 319 aaPredicted RBP24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 OR10H1Q9Y4A9 318 aa24.39■■□□□ 1.49
ATPAF1-202ENST00000371937 M0R3H8 397 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 PIGAP37287 484 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 SMIM11AP58511 58 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 RAB15P59190 212 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 INSM1Q01101 510 aaPredicted RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 GANABQ14697 944 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 SLC36A3Q495N2 470 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 LIN52Q52LA3 116 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 COLEC12Q5KU26 742 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 SWT1Q5T5J6 900 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 NPSR1Q6W5P4 371 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 RBM45Q8IUH3 476 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 LACC1Q8IV20 430 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 MORN4Q8NDC4 146 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 OR4C15Q8NGM1 316 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 GIPC3Q8TF64 312 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 CYGBQ8WWM9 190 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 METTL21AQ8WXB1 218 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 BARD1Q99728 777 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 ARHGDIGQ99819 225 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 ANKRD60Q9BZ19 345 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 SOX17Q9H6I2 414 aaPredicted RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 FBXO34Q9NWN3 711 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 COPS7AQ9UBW8 275 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 ACAD8Q9UKU7 415 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 PCDHGA1Q9Y5H4 931 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 H0YAE9 185 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 CYC1P08574 325 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 PPICP45877 212 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 LAPTM4AQ15012 233 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 FLYWCH1Q4VC44 716 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 OR6T1Q8NGN1 323 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 OR52J3Q8NH60 311 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 WFDC6Q9BQY6 131 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 ULBP3Q9BZM4 244 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 ARMC7Q9H6L4 198 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 KIF17Q9P2E2 1029 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 NXT1Q9UKK6 140 aaKnown RBP24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 CBLCQ9ULV8 474 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 LOXL2Q9Y4K0 774 aa24.38■■□□□ 1.49
ATPAF1-202ENST00000371937 NINQ8N4C6 2090 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 COL27A1Q8IZC6 1860 aaPredicted RBP24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 FFAR1O14842 300 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 ALOX12BO75342 701 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 ZNF28P17035 718 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 CAPGP40121 348 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 EMP2P54851 167 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 MICAQ29983 383 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 DCAF12Q5T6F0 453 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 LANCL3Q6ZV70 420 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 CHERPQ8IWX8 916 aaKnown RBP24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 TAGAPQ8N103 731 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 OR4N2Q8NGD1 307 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 OR1N1Q8NGS0 311 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 NR4A3Q92570 626 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 WDR54Q9H977 334 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 NMNAT1Q9HAN9 279 aaPredicted RBP24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 PARD6AQ9NPB6 346 aa24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 GPN3Q9UHW5 284 aaPredicted RBP24.37■■□□□ 1.49
ATPAF1-202ENST00000371937 NID1P14543 1247 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 IGFBP5P24593 272 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 LIMS1P48059 325 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 RFX3P48380 749 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms