RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ARSAP15289 507 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 ADH6P28332 368 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 NKX3-2P78367 333 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 MS4A15Q8N5U1 240 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 HCFC1R1Q9NWW0 138 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 ZNF217O75362 1048 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 HNRNPA2B1P22626 353 aaKnown RBP20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 CCDC28AQ8IWP9 274 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 OR51T1Q8NGJ9 327 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 OR5D16Q8NGK9 328 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 ZMYND19Q96E35 227 aaPredicted RBP20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 MACROD1Q9BQ69 325 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 PPIL3Q9H2H8 161 aaKnown RBP20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 CTSAP10619 480 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 RAC2P15153 192 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 DRD5P21918 477 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 ANKRD13BQ86YJ7 626 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 CACNG6Q9BXT2 260 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 CPEB1Q9BZB8 566 aaKnown RBP20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 OR5B2Q96R09 309 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 PRELID1Q9Y255 219 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 IGKV6-21A0A0C4DH24 114 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 TRIM64CA6NLI5 447 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 FRS3O43559 492 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 IFNA1P01562 189 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 FXYD4P59646 89 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 NKPD1Q17RQ9 610 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 PRAMEF8Q5VWM4 474 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 PRAMEF7Q5VXH5 474 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 ZNF619Q8N2I2 560 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 SGCZQ96LD1 299 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 FIZ1Q96SL8 496 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 CDC6Q99741 560 aa20.96■□□□□ 0.95
TM9SF3-201ENST00000371142 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 FBXO45P0C2W1 286 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 DEFB133Q30KQ1 61 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 GARNL3Q5VVW2 1013 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 PRSS48Q7RTY5 328 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 MDGA1Q8NFP4 955 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 FAM71F1Q96KD3 344 aaPredicted RBP20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 C17orf105B2RV13 164 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 P2RY2P41231 377 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 RANBP10Q6VN20 620 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 MEPEQ9NQ76 525 aaPredicted RBP20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 NAALAD2Q9Y3Q0 740 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 BOLA2-SMG1P6H3BVE0 249 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 CSNK2A1P68400 391 aaPredicted RBP20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 CSNK2A3Q8NEV1 391 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 SYPP08247 313 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 PNMTP11086 282 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 PTGER1P34995 402 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 GOLM1Q8NBJ4 401 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 ALG8Q9BVK2 526 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 DMRT3Q9NQL9 472 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 M0QZQ0 153 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 CRTAPO75718 401 aaPredicted RBP20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 CTHP32929 405 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 SHISA6Q6ZSJ9 500 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 PXKQ7Z7A4 578 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 NDNFQ8TB73 568 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 CHPT1Q8WUD6 406 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 VDAC3Q9Y277 283 aa20.95■□□□□ 0.94
TM9SF3-201ENST00000371142 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 A0A1W2PQL4 384 aaPredicted RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SCD5Q86SK9 330 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 ACVR1CQ8NER5 493 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 OR7G3Q8NG95 312 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 APOOQ9BUR5 198 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 GSTO2Q9H4Y5 243 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 FAIMQ9NVQ4 179 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 ACTR10Q9NZ32 417 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 USP36Q9P275 1121 aaKnown RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 RIMS3Q9UJD0 308 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 IL4RP24394 825 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 ETV4P43268 484 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CAMLGP49069 296 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CLDN2P57739 230 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CPOQ8IVL8 374 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SYT14Q8NB59 555 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 ZFAND2BQ8WV99 257 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 HHATLQ9HCP6 504 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 ACOT13Q9NPJ3 140 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CSNK1G3Q9Y6M4 447 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 RDH16O75452 317 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 KNG1P01042 644 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SNRPD2P62316 118 aaKnown RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SELENOWP63302 87 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 AP1S3Q96PC3 154 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SMAD6O43541 496 aaKnown RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 APOC3P02656 99 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 LCATP04180 440 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 EPHA1P21709 976 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 SGSHP51688 502 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 NKX2-5P52952 324 aaPredicted RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 CHDHQ8NE62 594 aaPredicted RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 RRNAD1Q96FB5 475 aaKnown RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 BAZ2AQ9UIF9 1905 aaKnown RBP20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 GJE1A6NN92 205 aa20.94■□□□□ 0.94
TM9SF3-201ENST00000371142 NPC1O15118 1278 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms