RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ANHXE9PGG2 379 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 CD1DP15813 335 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TSPYL5Q86VY4 417 aaPredicted RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 IL17RCQ8NAC3 791 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TGM7Q96PF1 710 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TMEM175Q9BSA9 504 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SDHAF2Q9NX18 166 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TSPAN6O43657 245 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 TLDC1Q6P9B6 456 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 GDPD1Q8N9F7 314 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 GLIS1Q8NBF1 620 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SPTSSAQ969W0 71 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 PDCD1LG2Q9BQ51 273 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 PAPOLGQ9BWT3 736 aaKnown RBP11.85□□□□□ -0.51
HCFC1-202ENST00000369984 GCM1Q9NP62 436 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 INSL6Q9Y581 213 aa11.85□□□□□ -0.51
HCFC1-202ENST00000369984 SLC22A5O76082 557 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ARHGEF15O94989 841 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SRYQ05066 204 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 DLX2Q07687 328 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 COQ5Q5HYK3 327 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ST6GALNAC5Q9BVH7 336 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 APMAPQ9HDC9 416 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ZFP57Q9NU63 452 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 UPK1BO75841 260 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SOX3P41225 446 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 VEGFCP49767 419 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SGSHP51688 502 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 OR4C11Q6IEV9 310 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF425Q6IV72 752 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 TMEM150AQ86TG1 271 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 GPR137CQ8N3F9 429 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 BEST4Q8NFU0 473 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SDSLQ96GA7 329 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 IL21RQ9HBE5 538 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 FAM227AF5H4B4 570 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 LEFTY1O75610 366 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 FAM214AQ32MH5 1076 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 FAM69BQ5VUD6 431 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 MINDY1Q8N5J2 469 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 METTL2AQ96IZ6 378 aaKnown RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF681Q96N22 645 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 TP53TG5Q9Y2B4 290 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 C1GALT1C1LP0DN25 315 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 PRPH2P23942 346 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ERVK-16P61578 105 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 RAB35Q15286 201 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 METTL2BQ6P1Q9 378 aaKnown RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF440Q8IYI8 595 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SH3BGRL2Q9UJC5 107 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SLC16A5O15375 505 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 RFPL3O75679 317 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ETV5P41161 510 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 HTRA4P83105 476 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 OR5W2Q8NH69 310 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 IL20RAQ9UHF4 553 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ARHGEF17Q96PE2 2063 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 C1orf226A1L170 272 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 A6NHS1 94 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 GJE1A6NN92 205 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 VEGFDO43915 354 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 EPOP01588 193 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 GJA5P36382 358 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ELOCQ15369 112 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 PLEKHJ1Q9NW61 149 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SYT7O43581 403 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 COL9A3Q14050 684 aaPredicted RBP11.84□□□□□ -0.51
HCFC1-202ENST00000369984 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 ALG8Q9BVK2 526 aa11.84□□□□□ -0.51
HCFC1-202ENST00000369984 NKX3-2P78367 333 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 DEFB134Q4QY38 66 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 BTBD2Q9BX70 525 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
HCFC1-202ENST00000369984 LEFTY2O00292 366 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 DNAJB6O75190 326 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 PTPRRQ15256 657 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 KIAA1211LQ6NV74 962 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 NUBP2Q9Y5Y2 271 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 IMPA2O14732 288 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 JRKO75564 520 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 TXNDC12O95881 172 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 CAPNS1P04632 268 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 PGCP20142 388 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 RFC2P35250 354 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 CHFRQ96EP1 664 aa11.83□□□□□ -0.52
HCFC1-202ENST00000369984 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms