RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NAALAD2Q9Y3Q0 740 aa10□□□□□ -0.81
TPM3-212ENST00000368533 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
TPM3-212ENST00000368533 HSPE1-MOB4S4R3N1 261 aa10□□□□□ -0.81
TPM3-212ENST00000368533 MEIOCA2RUB1 952 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 C5orf58C9J3I9 102 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 TRIM77I1YAP6 450 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 BCAT2O15382 392 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 NOS1APO75052 506 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 STSP08842 583 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 HIST1H1TP22492 207 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 ATP5A1P25705 553 aaKnown RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 NDUFS1P28331 727 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 CXCR4P61073 352 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 UBE2IP63279 158 aaKnown RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 ZNF267Q14586 743 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 SLC9A5Q14940 896 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ZMYND11Q15326 602 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 SYT6Q5T7P8 510 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 ZNF425Q6IV72 752 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ABHD17CQ6PCB6 329 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 IDO2Q6ZQW0 420 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ASPGQ86U10 573 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 GRPEL2Q8TAA5 225 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 IPCEF1Q8WWN9 437 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 RASSF5Q8WWW0 418 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 TRNT1Q96Q11 434 aaKnown RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 NIPSNAP1Q9BPW8 284 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 CCDC3Q9BQI4 270 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 SLA2Q9H6Q3 261 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 TIGARQ9NQ88 270 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PRDM7Q9NQW5 492 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 TBC1D24Q9ULP9 559 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 SNX7Q9UNH6 387 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 LYVE1Q9Y5Y7 322 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 SERTM1A2A2V5 107 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PATE3B3GLJ2 98 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PDPK1O15530 556 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 KCNJ13O60928 360 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 LDB3O75112 727 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ZNF780AO75290 641 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 CLEC3AO75596 197 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 AIFM1O95831 613 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PCSK2P16519 638 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 DDCP20711 480 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PCGF2P35227 344 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 BLKP51451 505 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 NCBP2P52298 156 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM3-212ENST00000368533 CRYBA2P53672 197 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ERV3-1Q14264 604 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 LRRC20Q8TCA0 184 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 PIGKQ92643 395 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 MYDGFQ969H8 173 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 COQ8BQ96D53 544 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 BBS4Q96RK4 519 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 SDHCQ99643 169 aaPredicted RBP9.99□□□□□ -0.81
TPM3-212ENST00000368533 EPYCQ99645 322 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 CHCHD6Q9BRQ6 235 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 HDHD5Q9BXW7 423 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 ITPAQ9BY32 194 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 TRPC4Q9UBN4 977 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 CLCA2Q9UQC9 943 aa9.99□□□□□ -0.81
TPM3-212ENST00000368533 C1orf226A1L170 272 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 NPIPB8E9PQR5 432 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 LOC110117498-PIK3R3F6TDL0 507 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 SGK494L7N484 410 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 SLC15A1P46059 708 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 CRISP3P54108 245 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 DEFA1P59665 94 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 DEFA3P59666 94 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 CSTF1Q05048 431 aaKnown RBP9.98□□□□□ -0.81
TPM3-212ENST00000368533 HEPACAMQ14CZ8 416 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 GPR19Q15760 415 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FAHD1Q6P587 224 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 TMEM107Q6UX40 140 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 NELL2Q99435 816 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 OR51E2Q9H255 320 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 SOHLH2Q9NX45 425 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 PCDHGB1Q9Y5G3 927 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 LEUTXA8MZ59 168 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 C2orf74A8MZ97 194 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 RNASET2O00584 256 aaKnown RBP9.98□□□□□ -0.81
TPM3-212ENST00000368533 PCDH17O14917 1159 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 RGS5O15539 181 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 GPR37L1O60883 481 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 B4GALT2O60909 372 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 OR7A10O76100 309 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 UBXN7O94888 489 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 CFIP05156 583 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 YES1P07947 543 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FHP07954 510 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 SLC35G6P0C7Q6 338 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 TGFBR2P37173 567 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 OR1D5P58170 312 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 ELOCQ15369 112 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 OR2L5Q8NG80 312 aa9.98□□□□□ -0.81
TPM3-212ENST00000368533 FBLIM1Q8WUP2 373 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms