RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 AGAP20933 346 aa9□□□□□ -0.97
CD48-202ENST00000368046 GDF1P27539 372 aa9□□□□□ -0.97
CD48-202ENST00000368046 PTPN6P29350 595 aa9□□□□□ -0.97
CD48-202ENST00000368046 CCT3P49368 545 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 PRR5P85299 388 aa9□□□□□ -0.97
CD48-202ENST00000368046 ADORA2A-AS1P86434 159 aa9□□□□□ -0.97
CD48-202ENST00000368046 OCRLQ01968 901 aa9□□□□□ -0.97
CD48-202ENST00000368046 ZNF155Q12901 538 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 PGS1Q32NB8 556 aa9□□□□□ -0.97
CD48-202ENST00000368046 WLSQ5T9L3 541 aa9□□□□□ -0.97
CD48-202ENST00000368046 OGFOD2Q6N063 350 aa9□□□□□ -0.97
CD48-202ENST00000368046 ANGPTL8Q6UXH0 198 aa9□□□□□ -0.97
CD48-202ENST00000368046 C3P1Q6ZMU1 363 aa9□□□□□ -0.97
CD48-202ENST00000368046 SPATA19Q7Z5L4 167 aa9□□□□□ -0.97
CD48-202ENST00000368046 CD163Q86VB7 1156 aa9□□□□□ -0.97
CD48-202ENST00000368046 PLCZ1Q86YW0 608 aa9□□□□□ -0.97
CD48-202ENST00000368046 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 ZNF808Q8N4W9 903 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
CD48-202ENST00000368046 WDSUB1Q8N9V3 476 aa9□□□□□ -0.97
CD48-202ENST00000368046 OR8J2Q8NGG1 315 aa9□□□□□ -0.97
CD48-202ENST00000368046 NEIL3Q8TAT5 605 aa9□□□□□ -0.97
CD48-202ENST00000368046 PIWIL2Q8TC59 973 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 FAM110BQ8TC76 370 aa9□□□□□ -0.97
CD48-202ENST00000368046 GPR151Q8TDV0 419 aa9□□□□□ -0.97
CD48-202ENST00000368046 PHF10Q8WUB8 498 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 RNF138Q8WVD3 245 aa9□□□□□ -0.97
CD48-202ENST00000368046 ITLN2Q8WWU7 325 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 SLC9A6Q92581 669 aa9□□□□□ -0.97
CD48-202ENST00000368046 HOXB13Q92826 284 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 EFHD2Q96C19 240 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 FAM120BQ96EK7 910 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 GIMAP5Q96F15 307 aa9□□□□□ -0.97
CD48-202ENST00000368046 DMRTA2Q96SC8 542 aa9□□□□□ -0.97
CD48-202ENST00000368046 SH3GL2Q99962 352 aa9□□□□□ -0.97
CD48-202ENST00000368046 OSBPL11Q9BXB4 747 aa9□□□□□ -0.97
CD48-202ENST00000368046 DPY30Q9C005 99 aa9□□□□□ -0.97
CD48-202ENST00000368046 UBQLN3Q9H347 655 aa9□□□□□ -0.97
CD48-202ENST00000368046 TP63Q9H3D4 680 aaPredicted RBP9□□□□□ -0.97
CD48-202ENST00000368046 EXO5Q9H790 373 aa9□□□□□ -0.97
CD48-202ENST00000368046 GALNT9Q9HCQ5 603 aa9□□□□□ -0.97
CD48-202ENST00000368046 SDHAF3Q9NRP4 125 aa9□□□□□ -0.97
CD48-202ENST00000368046 GIN1Q9NXP7 522 aa9□□□□□ -0.97
CD48-202ENST00000368046 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
CD48-202ENST00000368046 PCDHGB3Q9Y5G1 929 aa9□□□□□ -0.97
CD48-202ENST00000368046 LIPGQ9Y5X9 500 aa9□□□□□ -0.97
CD48-202ENST00000368046 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
CD48-202ENST00000368046 HECTD1Q9ULT8 2610 aa9□□□□□ -0.97
CD48-202ENST00000368046 USP9YO00507 2555 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 PRSS51A0A1B0GVH4 220 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 SDHDO14521 159 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 ANKRD28O15084 1053 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 FADS1O60427 444 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 HMGN2P05204 90 aaKnown RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 KITP10721 976 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 CYP4B1P13584 511 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 EFNA1P20827 205 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 EPHA3P29320 983 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 TRPC1P48995 793 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 PRIM2P49643 509 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 CLK3P49761 638 aaKnown RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 ART3Q13508 389 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 TOMM20Q15388 145 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 ANXA8L1Q5VT79 327 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 SP5Q6BEB4 398 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 OR4F3Q6IEY1 312 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 ZNF585AQ6P3V2 769 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 WDR53Q7Z5U6 358 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 SLC16A11Q8NCK7 471 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 OR5M9Q8NGP3 310 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 PIK3R3Q92569 461 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 MOAP1Q96BY2 351 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 C16orf58Q96GQ5 468 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 TIMP4Q99727 224 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 WDR55Q9H6Y2 383 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 EQTNQ9NQ60 294 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 PNPLA3Q9NST1 481 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 SIRT3Q9NTG7 399 aaPredicted RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 ZCCHC3Q9NUD5 404 aaKnown RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 PCDHGB4Q9UN71 923 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 MRPS18CQ9Y3D5 142 aaKnown RBP8.99□□□□□ -0.97
CD48-202ENST00000368046 SNX8Q9Y5X2 465 aa8.99□□□□□ -0.97
CD48-202ENST00000368046 GXYLT2A0PJZ3 443 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 AHRRA9YTQ3 701 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 HMGB1P1B2RPK0 211 aaPredicted RBP8.98□□□□□ -0.97
CD48-202ENST00000368046 RNASET2O00584 256 aaKnown RBP8.98□□□□□ -0.97
CD48-202ENST00000368046 CFLARO15519 480 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 SCN2BO60939 215 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 WDR1O75083 606 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 C6orf47O95873 294 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 ALOX5P09917 674 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 ACP2P11117 423 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 GABRA1P14867 456 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 ACVR2AP27037 513 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 LCN1P31025 176 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 GAS1P54826 345 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 WNT3P56703 355 aa8.98□□□□□ -0.97
CD48-202ENST00000368046 HBA1P69905 142 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms