RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SELENONQ9NZV5 590 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
USF1-202ENST00000368020 KCNE3Q9Y6H6 103 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 SDK1Q7Z5N4 2213 aa13.1□□□□□ -0.31
USF1-202ENST00000368020 ANKRD33BA6NCL7 494 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 CCRL2O00421 344 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 PFDN1O60925 122 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 ENTPD6O75354 484 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 STX11O75558 287 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 PTHP01270 115 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
USF1-202ENST00000368020 TNNI3P19429 210 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 AVPR2P30518 371 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 OPRL1P41146 370 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 RAB38P57729 211 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 NCS1P62166 190 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 FZD2Q14332 565 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 RGS21Q2M5E4 152 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 TUBA3EQ6PEY2 450 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 Q6ZNX1 250 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 PLEKHM3Q6ZWE6 761 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 COMTD1Q86VU5 262 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 FRMD1Q8N878 549 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
USF1-202ENST00000368020 SLC9A6Q92581 669 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 OSTF1Q92882 214 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 IL4I1Q96RQ9 567 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 MGLLQ99685 303 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 ZNF350Q9GZX5 532 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 DUSP15Q9H1R2 295 aaPredicted RBP13.09□□□□□ -0.31
USF1-202ENST00000368020 UCK1Q9HA47 277 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 NLGN3Q9NZ94 848 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 CEP192Q8TEP8 1941 aa13.09□□□□□ -0.31
USF1-202ENST00000368020 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 A0A1W2PS29 197 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 HYKKA2RU49 373 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 COQ9O75208 318 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 GUSBP08236 651 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 DBTP11182 482 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 FUT4P22083 530 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 FPR3P25089 353 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CD27P26842 260 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 STAT5AP42229 794 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 PDX1P52945 283 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SIM1P81133 766 aaPredicted RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 MED22Q15528 200 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 FHL5Q5TD97 284 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 VRK2Q86Y07 508 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ZNF619Q8N2I2 560 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 OR6Q1Q8NGQ2 317 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 OR9Q1Q8NGQ5 310 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CDS1Q92903 461 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 HSPBAP1Q96EW2 488 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SLIRPQ9GZT3 109 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 SAP130Q9H0E3 1048 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SIAEQ9HAT2 523 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 MED17Q9NVC6 651 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CFL2Q9Y281 166 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 A0A087WUU8 490 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 TNFRSF10AO00220 468 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CYR61O00622 381 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SRPX2O60687 465 aaPredicted RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 FMO6PO60774 539 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SCG5P05408 212 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 GADD45AP24522 165 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 SOX6P35712 828 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 NUBP1P53384 320 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 RPL6Q02878 288 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 ZNF91Q05481 1191 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 DMWDQ09019 674 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 GINS1Q14691 196 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ELOCQ15369 112 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ZSWIM7Q19AV6 140 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 ZNF404Q494X3 552 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
USF1-202ENST00000368020 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 TCEANCQ8N8B7 351 aa13.08□□□□□ -0.32
USF1-202ENST00000368020 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms