RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PADI1Q9ULC6 663 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FAM171A2A8MVW0 826 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 IGLV3-27P01718 113 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 UGT2B7P16662 529 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 CELP19835 753 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 DNASE1L3Q13609 305 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 KCNAB1Q14722 419 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 SCGB2B2Q4G0G5 96 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GGTA1PQ4G0N0 100 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 AFMIDQ63HM1 303 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 RNF175Q8N4F7 328 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 NETO1Q8TDF5 533 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 DYNLRB1Q9NP97 96 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 TUBA8Q9NY65 449 aaPredicted RBP10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GPR45Q9Y5Y3 372 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FAM172BPA6NC97 362 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 SLC22A31A6NKX4 558 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF432O94892 652 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GPR4P46093 362 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 RBM39Q14498 530 aaKnown RBP10.92□□□□□ -0.66
SYNE1-204ENST00000367248 BCL7AQ4VC05 210 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 CPZQ66K79 652 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM184AQ6ZMB5 413 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 TESCQ96BS2 214 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 H0YIV9 168 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CR2P20023 1033 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 KIAA1024LP59773 190 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 RUNDC3AQ59EK9 446 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PIGGQ5H8A4 983 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SYT14Q8NB59 555 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 GALNT6Q8NCL4 622 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PDXPQ96GD0 296 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TCTN2Q96GX1 697 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 KCNS2Q9ULS6 477 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 NME7Q9Y5B8 376 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF35P13682 527 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CPMP14384 443 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PRKCAP17252 672 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PYCR1P32322 319 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SLCO4C1Q6ZQN7 724 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TIGD4Q8IY51 512 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 UBALD2Q8IYN6 164 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SLC30A3Q99726 388 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 UTP23Q9BRU9 249 aaKnown RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SEC14L4Q9UDX3 406 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 MCTS1Q9ULC4 181 aaKnown RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TNRC6CQ9HCJ0 1690 aaKnown RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 H3BSA7 217 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 KDM4BO94953 1096 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 MALLQ13021 153 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 DEFB109BQ30KR1 87 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CCDC74AQ96AQ1 378 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 DDIT4LQ96D03 193 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 HYAL1Q12794 435 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TUBA3CQ13748 450 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PGBD2Q6P3X8 592 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM64Q6YI46 380 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SLC44A3Q8N4M1 653 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 THAP4Q8WY91 577 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TOGARAM1Q9Y4F4 1720 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TAF1P21675 1872 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 E2F3O00716 465 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TLE3Q04726 772 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 GPR19Q15760 415 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF585AQ6P3V2 769 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 WDR20Q8TBZ3 569 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TBC1D20Q96BZ9 403 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SP140LQ9H930 580 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PCDHB16Q9NRJ7 776 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 M0R3H8 397 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SULT2B1O00204 365 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CASC3O15234 703 aaKnown RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 YKT6O15498 198 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 TNFSF15O95150 251 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CDRT1O95170 752 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 RPS26P11Q5JNZ5 115 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 GTF2IRD2BQ6EKJ0 949 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 CCSAPQ6IQ19 270 aaPredicted RBP10.91□□□□□ -0.66
SYNE1-204ENST00000367248 GTF2IRD2Q86UP8 949 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 L3MBTL4Q8NA19 623 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 OR51Q1Q8NH59 317 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 PATE1Q8WXA2 126 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 SLC41A3Q96GZ6 507 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 LRR1Q96L50 414 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 BIRC8Q96P09 236 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 FN3KQ9H479 309 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 BAIAP2Q9UQB8 552 aa10.91□□□□□ -0.66
SYNE1-204ENST00000367248 IL32P24001 234 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 PIN1Q13526 163 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-204ENST00000367248 TNFAIP8L3Q5GJ75 292 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 GPALPP1Q8IXQ4 340 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 OR52R1Q8NGF1 315 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 PROKR1Q8TCW9 393 aa10.9□□□□□ -0.66
SYNE1-204ENST00000367248 TSPAN10Q9H1Z9 355 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-204ENST00000367248 ACSS1Q9NUB1 689 aaPredicted RBP10.9□□□□□ -0.66
SYNE1-204ENST00000367248 UBAP1Q9NZ09 502 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms