RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 GLIPR2Q9H4G4 154 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 HCFC1R1Q9NWW0 138 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 VCANP13611 3396 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 QSOX1O00391 747 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 HYAL3O43820 417 aaPredicted RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 SLC22A5O76082 557 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 CD3GP09693 182 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 COX10Q12887 443 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 SMARCD3Q6STE5 483 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ZNF547Q8IVP9 402 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 IL17RCQ8NAC3 791 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ZNF680Q8NEM1 530 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 WDR34Q96EX3 536 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ABHD1Q96SE0 405 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ZFP64Q9NPA5 681 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 EXOSC1Q9Y3B2 195 aaKnown RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 TEX28O15482 410 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 RFPL3O75679 317 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 POP7O75817 140 aaKnown RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 SLC6A1P30531 599 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 AHRP35869 848 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 CCR6P51684 374 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 PER3P56645 1201 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 ZNF267Q14586 743 aaPredicted RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 MPP7Q5T2T1 576 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 IKBIPQ70UQ0 350 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 RRM2BQ7LG56 351 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 KLHDC8AQ8IYD2 350 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 CPXM2Q8N436 756 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
PRKN-205ENST00000366897 SLC38A2Q96QD8 506 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 C17orf62Q9BQA9 187 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 C1QTNF6Q9BXI9 259 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
PRKN-205ENST00000366897 SCN5AQ14524 2016 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 SOD2P04179 222 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
PRKN-205ENST00000366897 NCBP2P52298 156 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRKN-205ENST00000366897 DCDC1P59894 354 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 DUSP2Q05923 314 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 FZD5Q13467 585 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 NTRK2Q16620 822 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 ENTPD8Q5MY95 495 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 MZT2AQ6P582 158 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 ARL9Q6T311 187 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 FAM129CQ86XR2 697 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 CPOQ8IVL8 374 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 LRRC17Q8N6Y2 441 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 SPERTQ8NA61 448 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 BBS10Q8TAM1 723 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 POF1BQ8WVV4 589 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 KAT2AQ92830 837 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 NEUROD4Q9HD90 331 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 SLCO1C1Q9NYB5 712 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 TAS2R7Q9NYW3 318 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 KCNN3Q9UGI6 736 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 RASD1Q9Y272 281 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.73□□□□□ -0.37
PRKN-205ENST00000366897 SGK494L7N484 410 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 TRIM3O75382 744 aaPredicted RBP12.73□□□□□ -0.37
PRKN-205ENST00000366897 HMGN2P05204 90 aaKnown RBP12.73□□□□□ -0.37
PRKN-205ENST00000366897 TYRP14679 529 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 BTCP35070 178 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 CLDN2P57739 230 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 RPA4Q13156 261 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 TEX261Q6UWH6 196 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 RFT1Q96AA3 541 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 PRRC1Q96M27 445 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 ZFP3Q96NJ6 502 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 ZDHHC5Q9C0B5 715 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 TM7SF3Q9NS93 570 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 U3KQ87 197 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
PRKN-205ENST00000366897 E9PI62 339 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 OR1F1O43749 312 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 EFEMP2O95967 443 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 PDGFAP04085 211 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 CSF2RAP15509 400 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 CCR2P41597 374 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 ATP12AP54707 1039 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 CDONQ4KMG0 1287 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 C9orf50Q5SZB4 431 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 PARS2Q7L3T8 475 aaKnown RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 CCDC116Q8IYX3 515 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 KLHL36Q8N4N3 616 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms