RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CLLU1Q5K131 121 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 SPRED2Q7Z698 418 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 GPALPP1Q8IXQ4 340 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 TRAM1L1Q8N609 369 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 PRR14Q9BWN1 585 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 RC3H2Q9HBD1 1191 aaKnown RBP18.46■□□□□ 0.55
TRIM58-201ENST00000366481 EMC7Q9NPA0 242 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 TRPC4Q9UBN4 977 aa18.46■□□□□ 0.55
TRIM58-201ENST00000366481 A8MVJ9 347 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 M0R3H8 397 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 LGALS8O00214 317 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 FAAHO00519 579 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 FAM157BP0CG42 384 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 RRASP10301 218 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 LCN1P31025 176 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 LYPD4Q6UWN0 246 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 GPR135Q8IZ08 494 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 HORMAD2Q8N7B1 307 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 EGLN3Q9H6Z9 239 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 METTL17Q9H7H0 456 aaPredicted RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 LIN7BQ9HAP6 207 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 FZD3Q9NPG1 666 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TDP1Q9NUW8 608 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 MRPL39Q9NYK5 338 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 MRPL15Q9P015 296 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 IL36AQ9UHA7 158 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 CHURC1-FNTBB4DL54 471 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SGK494L7N484 410 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SOD1P00441 154 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 PRKAG1P54619 331 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TCTN3Q6NUS6 607 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TEX47Q8TBZ9 253 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SGTBQ96EQ0 304 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SORCS2Q96PQ0 1159 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 MED18Q9BUE0 208 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SAV1Q9H4B6 383 aaPredicted RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 IL20RAQ9UHF4 553 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 QSOX1O00391 747 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 DVL2O14641 736 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SLC28A2O43868 658 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SLC19A2O60779 497 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 MTRF1O75570 445 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 NTN1O95631 604 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 LALBAP00709 142 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TCRBP04435 133 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 ACSM4P0C7M7 580 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 ACSL1P33121 698 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 OPRD1P41143 372 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 RPS7P62081 194 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 BTG1P62324 171 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 ZNF770Q6IQ21 691 aaPredicted RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 FAM83HQ6ZRV2 1179 aaPredicted RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 METTL3Q86U44 580 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 OR4K5Q8NGD3 323 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 OR5D16Q8NGK9 328 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TOE1Q96GM8 510 aaKnown RBP18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TMEM19Q96HH6 336 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 RBP7Q96R05 134 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 TAAR2Q9P1P5 351 aa18.45■□□□□ 0.54
TRIM58-201ENST00000366481 SHISA3A0PJX4 238 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 SEMA7AO75326 666 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 RGS11O94810 467 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CXCL10P02778 98 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 GPR1P46091 355 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 PRLHRP49683 370 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CLCNKAP51800 687 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 TUSC1Q2TAM9 212 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 C12orf73Q69YU5 71 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 PODNL1Q6PEZ8 512 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 ADCK2Q7Z695 626 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 C12orf40Q86WS4 652 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 XAGE5Q8WWM1 108 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 SECISBP2Q96T21 854 aaKnown RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CUEDC1Q9NWM3 386 aaPredicted RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 H2AFY2Q9P0M6 372 aaPredicted RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 UGDHO60701 494 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 POP7O75817 140 aaKnown RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 HLA-DQB1P01920 261 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 HOXD4P09016 255 aaPredicted RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 C1GALT1C1LP0DN25 315 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 PCSK2P16519 638 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 LIMS1P48059 325 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 CDH11P55287 796 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 ERVFC1P60507 584 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 TPBGQ13641 420 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 OR6M1Q8NGM8 313 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 FCRL4Q96PJ5 515 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 BRF2Q9HAW0 419 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 KCNK12Q9HB15 430 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 TAC3Q9UHF0 121 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 SYNDIG1LA6NDD5 238 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 GPR37L1O60883 481 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 RECKO95980 971 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 MANFP55145 182 aaKnown RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 PUDPQ08623 228 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 OCLNQ16625 522 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
TRIM58-201ENST00000366481 GIMAP1Q8WWP7 306 aa18.44■□□□□ 0.54
TRIM58-201ENST00000366481 SLC5A11Q8WWX8 675 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms