RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SPPL2BQ8TCT7 592 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 C2orf15Q8WU43 125 aaKnown RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TMEM190Q8WZ59 177 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 MRPS31Q92665 395 aaKnown RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 BPIFA2Q96DR5 249 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 C8orf76Q96K31 380 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZNF560Q96MR9 790 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 F2RL3Q96RI0 385 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TSPAN18Q96SJ8 248 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 SPXQ9BT56 116 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TRIM9Q9C026 710 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TNMDQ9H2S6 317 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 ZCCHC3Q9NUD5 404 aaKnown RBP4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 LRP12Q9Y561 859 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 SELENOKQ9Y6D0 94 aa4.84□□□□□ -1.63
RNU4-39P-201ENST00000362455 TENM4Q6N022 2769 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 PTPRJQ12913 1337 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 A0A1W2PR80 420 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF840PA6NDX5 716 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC9B1P1A6NJY1 282 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 HHLA1C9JL84 531 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC1A7O00341 560 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CHUKO15111 745 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 PSMD3O43242 534 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 KLF8O95600 359 aaPredicted RBP4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CHRNGP07510 517 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CTNNA2P26232 953 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 PRPHP41219 470 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 IFNAR2P48551 515 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 PGFP49763 221 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 TAF6P49848 677 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 GNB1P62873 340 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 GALK2Q01415 458 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 SMARCB1Q12824 385 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CEACAM7Q14002 265 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 GK2Q14410 553 aaPredicted RBP4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 EFTUD2Q15029 972 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF876PQ49A33 203 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ATP1A1-AS1Q5TC04 95 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF776Q68DI1 518 aaPredicted RBP4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 HOGA1Q86XE5 327 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CD302Q8IX05 232 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 CCDC185Q8N715 623 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 SPATA18Q8TC71 538 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 HAS2Q92819 552 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 DTD2Q96FN9 168 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF486Q96H40 463 aaPredicted RBP4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 RUFY1Q96T51 708 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 IL12RB2Q99665 862 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ACBD6Q9BR61 282 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 NTMT1Q9BV86 223 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 TIPINQ9BVW5 301 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 FGFBP2Q9BYJ0 223 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 WWTR1Q9GZV5 400 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ABCG8Q9H221 673 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ASB7Q9H672 318 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ODF2LQ9ULJ1 636 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ANGPTL3Q9Y5C1 460 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ETV7Q9Y603 341 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 TICRRQ7Z2Z1 1910 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF462Q96JM2 2506 aa4.83□□□□□ -1.64
RNU4-39P-201ENST00000362455 ARID2Q68CP9 1835 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 TRAV19A0A0A6YYK7 116 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 IGHV1OR15-9A0A0B4J2B8 117 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 TLR4O00206 839 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SYT7O43581 403 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SEC22BO75396 215 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 OAS1P00973 400 aaKnown RBP4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 AMBPP02760 352 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SERPINF2P08697 491 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 FERP16591 822 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GABRG2P18507 467 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 TNFSF10P50591 281 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 PAX9P55771 341 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 BTG1P62324 171 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC7A9P82251 487 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GUCY2DQ02846 1103 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GPR50Q13585 617 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 KYAT1Q16773 422 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 CFAP221Q4G0U5 840 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 FAM106AQ4KMX7 169 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 ARHGAP17Q68EM7 881 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 B3GLCTQ6Y288 498 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 Q6ZSR9 355 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 LPCAT2Q7L5N7 544 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF720Q7Z2F6 126 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GPBP1Q86WP2 473 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 STHQ8IWL8 128 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 OR5B17Q8NGF7 314 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 OMA1Q96E52 524 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 PCDHB18PQ96TA0 734 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 NAP1L3Q99457 506 aaPredicted RBP4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 LLPHQ9BRT6 129 aaKnown RBP4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 FAM213AQ9BRX8 229 aa4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 NUSAP1Q9BXS6 441 aaKnown RBP4.82□□□□□ -1.64
RNU4-39P-201ENST00000362455 GDAP2Q9NXN4 497 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms