RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SNX29P2Q8IUI4 249 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ZNF578Q96N58 590 aaPredicted RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 NEDD4LQ96PU5 975 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 UBQLN4Q9NRR5 601 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 TEX13DA0A0J9YY54 714 aaPredicted RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 FAM227AF5H4B4 570 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ELK4P28324 431 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 PRDX3P30048 256 aaKnown RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 THBS2P35442 1172 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 PRKCDQ05655 676 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 ULK3Q6PHR2 472 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 C19orf47Q8N9M1 422 aaKnown RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 CIDECQ96AQ7 238 aaPredicted RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.37
LDB3-202ENST00000361373 C1GALT1Q9NS00 363 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
LDB3-202ENST00000361373 H0YGG7 62 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 CDKN2CP42773 168 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 ARF3P61204 181 aaPredicted RBP12.71□□□□□ -0.38
LDB3-202ENST00000361373 CLEC14AQ86T13 490 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 TMEM239Q8WW34 195 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 FAM46AQ96IP4 442 aaKnown RBP12.71□□□□□ -0.38
LDB3-202ENST00000361373 FUZQ9BT04 418 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 ZNF696Q9H7X3 374 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 METTL8Q9H825 291 aaKnown RBP12.71□□□□□ -0.38
LDB3-202ENST00000361373 SMOXQ9NWM0 555 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 VAPAQ9P0L0 249 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.38
LDB3-202ENST00000361373 CDKN3Q16667 212 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 AFMIDQ63HM1 303 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 LEG1Q6P5S2 330 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 LRRC69Q6ZNQ3 347 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 ABHD12BQ7Z5M8 362 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 LHFPL3Q86UP9 236 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 MCTS1Q9ULC4 181 aaKnown RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 LSM1O15116 133 aaKnown RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 GALR3O60755 368 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 ATE1O95260 518 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 ZNF182P17025 639 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 DCTP40126 519 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 TAP2Q03519 686 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 HNRNPA0Q13151 305 aaKnown RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 ALG10Q5BKT4 473 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 SPIN3Q5JUX0 258 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 CARD17Q5XLA6 110 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 FCAMRQ8WWV6 532 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 NSG1A0A0A6YYJ2 146 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 SLCO2B1O94956 709 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 PTNP21246 168 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 MYF6P23409 242 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 IMPA1P29218 277 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 IRS1P35568 1242 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 CPOXP36551 454 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 SMAD4Q13485 552 aaKnown RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 PRAMEF8Q5VWM4 474 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 PRAMEF7Q5VXH5 474 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 PRSS48Q7RTY5 328 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 IL17RCQ8NAC3 791 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 ACOT11Q8WXI4 607 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 AKAP11Q9UKA4 1901 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 AP1G1O43747 822 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 RBBP9O75884 186 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 CSN2P05814 226 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 UGT2B7P16662 529 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 HOXB9P17482 250 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 GALK2Q01415 458 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 C6orf132Q5T0Z8 1188 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 LIX1LQ8IVB5 337 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 PNPLA1Q8N8W4 532 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 DOK4Q8TEW6 326 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 CCDC115Q96NT0 180 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 NMNAT1Q9HAN9 279 aaPredicted RBP12.7□□□□□ -0.38
LDB3-202ENST00000361373 CBLCQ9ULV8 474 aa12.7□□□□□ -0.38
LDB3-202ENST00000361373 SCGNO76038 276 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 CFL1P23528 166 aaKnown RBP12.69□□□□□ -0.38
LDB3-202ENST00000361373 TMPRSS9Q7Z410 1059 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 OR52R1Q8NGF1 315 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 OR4K13Q8NH42 304 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 MEPEQ9NQ76 525 aaPredicted RBP12.69□□□□□ -0.38
LDB3-202ENST00000361373 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 RGS9O75916 674 aaPredicted RBP12.69□□□□□ -0.38
LDB3-202ENST00000361373 SGSHP51688 502 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 KEAP1Q14145 624 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 AKIRIN2Q53H80 203 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 DCAF12Q5T6F0 453 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 OR8H1Q8NGG4 311 aa12.69□□□□□ -0.38
LDB3-202ENST00000361373 THAP6Q8TBB0 222 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms