RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 MS4A12Q9NXJ0 267 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TAC3Q9UHF0 121 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ENOPH1Q9UHY7 261 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 DAPK2Q9UIK4 370 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FAM32AQ9Y421 112 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SNX8Q9Y5X2 465 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 A3GALT2U3KPV4 340 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PLXND1Q9Y4D7 1925 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ANKDD1BA6NHY2 528 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 METTL15A6NJ78 407 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 RTCAO00442 366 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SERPINB7O75635 380 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 NFATC1O95644 943 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PTHP01270 115 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 IGLV1-40P01703 118 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 IFNW1P05000 195 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 POU2F1P14859 743 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CDH3P22223 829 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CXCR2P25025 360 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 IL12RB1P42701 662 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SLC15A1P46059 708 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PPP5CP53041 499 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MAPK12P53778 367 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CRISP1P54107 249 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CDK3Q00526 305 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 REEP5Q00765 189 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FPGSQ05932 587 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FAM214AQ32MH5 1076 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FAM78AQ5JUQ0 283 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 COLEC12Q5KU26 742 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PIP5KL1Q5T9C9 394 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 C17orf64Q86WR6 236 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SNX29P2Q8IUI4 249 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PLD3Q8IV08 490 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MMAAQ8IVH4 418 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 B3GNT7Q8NFL0 401 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CXorf40AQ8TE69 158 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 UTP15Q8TED0 518 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 RAB7BQ96AH8 199 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 AIF1LQ9BQI0 150 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 NELFAQ9H3P2 528 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ARMC7Q9H6L4 198 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FZD3Q9NPG1 666 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TM7SF3Q9NS93 570 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CNOT2Q9NZN8 540 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CACNB4O00305 520 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 HMGN4O00479 90 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 DSCR3O14972 297 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MPZL2O60487 215 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ANXA2P07355 339 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SERPINB1P30740 379 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GSTM5P46439 218 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 RGS6P49758 472 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CCR8P51685 355 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CRISP3P54108 245 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 COL4A3Q01955 1670 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 CNTN1Q12860 1018 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 GOLGA4Q13439 2230 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 HEPACAMQ14CZ8 416 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF404Q494X3 552 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TOR1AIP1Q5JTV8 583 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TCTN3Q6NUS6 607 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 USP43Q70EL4 1123 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 MCFD2Q8NI22 146 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM19Q96HH6 336 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 FUZQ9BT04 418 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PCBD2Q9H0N5 130 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 SLC25A19Q9HC21 320 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 PRSS16Q9NQE7 514 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 DYRK4Q9NR20 520 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-202ENST00000360642 RHCGQ9UBD6 479 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ADAM29Q9UKF5 820 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 ACAD8Q9UKU7 415 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 DAPP1Q9UN19 280 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 KLK4Q9Y5K2 254 aa6.86□□□□□ -1.31
CLCN3-202ENST00000360642 TRBV4-1A0A0J9YWV2 114 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 FEZF1A0PJY2 475 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 LINC01553A4QN01 128 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM247A6NEH6 219 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 M0R129 80 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 FRS3O43559 492 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TMPRSS11DO60235 418 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TOX4O94842 621 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 RPN2P04844 631 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 RPLP0P05388 317 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 BCHEP06276 602 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CD40LGP29965 261 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 OPRD1P41143 372 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CLK1P49759 484 aaKnown RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 CDC42P60953 191 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 FAM205BPQ63HN1 556 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 TNFAIP8L2Q6P589 184 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-202ENST00000360642 C6orf120Q7Z4R8 191 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 STX19Q8N4C7 294 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 LINC01555Q8NAE3 123 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 OR14K1Q8NGZ2 314 aa6.85□□□□□ -1.31
CLCN3-202ENST00000360642 C9orf43Q8TAL5 461 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms