RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RNASE11Q8TAA1 199 aaKnown RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 TCTEX1D2Q8WW35 142 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 ARHGAP9Q9BRR9 750 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 LHX6Q9UPM6 363 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 ABHD14A-ACY1A0A1B0GW23 586 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 PRAMEF25A6NGN4 478 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 RFXAPO00287 272 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 FPGTO14772 594 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 TGM5O43548 720 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 NFATC1O95644 943 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 HSD3B1P14060 373 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 AQP1P29972 269 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 NPBWR1P48145 328 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 MMP15P51511 669 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 MVDP53602 400 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 KRT33BQ14525 404 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 C18orf21Q32NC0 220 aaPredicted RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 ZNF613Q6PF04 617 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 NCEH1Q6PIU2 408 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 CASP12Q6UXS9 341 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 TCEANCQ8N8B7 351 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 SAMD12Q8N8I0 201 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 PNPLA2Q96AD5 504 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 KCTD12Q96CX2 325 aaKnown RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 VRK1Q99986 396 aaPredicted RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 GGACTQ9BVM4 153 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 TMPRSS5Q9H3S3 457 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 NMNAT1Q9HAN9 279 aaPredicted RBP14.81□□□□□ -0.04
RTN3-205ENST00000356000 DLGAP4Q9Y2H0 992 aa14.81□□□□□ -0.04
RTN3-205ENST00000356000 IFNGP01579 166 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 OSMP13725 252 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 OR1E2P47887 323 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 HTR5AP47898 357 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 GAS1P54826 345 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 KLF9Q13886 244 aaPredicted RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 ZNF770Q6IQ21 691 aaPredicted RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 DCUN1D3Q8IWE4 304 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 ZFP41Q8N8Y5 198 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 PANX1Q96RD7 426 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 SLC25A51Q9H1U9 297 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 CHST8Q9H2A9 424 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 KLHL1Q9NR64 748 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 NUDT4Q9NZJ9 180 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 FBXL3Q9UKT7 428 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 NUP214P35658 2090 aaPredicted RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 MAGEB17A8MXT2 336 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 GFYI3L273 518 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 J3KTA2 159 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 ULK1O75385 1050 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 SRPRAP08240 638 aaKnown RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 UBBP0CG47 229 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 UBCP0CG48 685 aaKnown RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 GRK4P32298 578 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 CXCR3P49682 368 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 RPS27AP62979 156 aaKnown RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 UBA52P62987 128 aaKnown RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 AFMIDQ63HM1 303 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 GLDNQ6ZMI3 551 aaPredicted RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 REC114Q7Z4M0 266 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 POMGNT2Q8NAT1 580 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 SLC25A28Q96A46 364 aa14.8□□□□□ -0.04
RTN3-205ENST00000356000 ZNF629Q9UEG4 869 aaPredicted RBP14.8□□□□□ -0.04
RTN3-205ENST00000356000 C2orf92A0A1B0GVN3 265 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 A0A1W2PRB8 838 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 EIF4E2O60573 245 aaKnown RBP14.79□□□□□ -0.04
RTN3-205ENST00000356000 IGHV2-5P01817 119 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 HEXBP07686 556 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CSF2RBP32927 897 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 THBS2P35442 1172 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CTSOP43234 321 aaPredicted RBP14.79□□□□□ -0.04
RTN3-205ENST00000356000 WDR5P61964 334 aaKnown RBP14.79□□□□□ -0.04
RTN3-205ENST00000356000 DGCR2P98153 550 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CAP1Q01518 475 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PEA15Q15121 130 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 ARSIQ5FYB1 569 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 H3F3CQ6NXT2 135 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 IL20RBQ6UXL0 311 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 ZNF621Q6ZSS3 439 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 HUS1BQ8NHY5 278 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 MEGF10Q96KG7 1140 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 TMED9Q9BVK6 235 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTN3-205ENST00000356000 PPP4R1LQ9P1A2 415 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 FXYD6-FXYD2A0A087WZ82 144 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 ITGA10O75578 1167 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 KRT33AO76009 404 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PRPS2P11908 318 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PAX6P26367 422 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PCGF2P35227 344 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 MTNR1BP49286 362 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 NDUFV1P49821 464 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 BPIFB3P59826 476 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 NHLRC1Q6VVB1 395 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 OR6V1Q8N148 313 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 FAM26EQ8N5C1 309 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 MEIOBQ8N635 442 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 ZNF485Q8NCK3 441 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 WNT2BQ93097 391 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 TSSK3Q96PN8 268 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 FXYD6Q9H0Q3 95 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms