RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SLC5A8Q8N695 610 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR5W2Q8NH69 310 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 SLC2A12Q8TD20 617 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 RNF128Q8TEB7 428 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 PRAMEF2O60811 474 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 GJB5O95377 273 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 CHRNB1P11230 501 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 JUNDP17535 347 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 CLECL1Q8IZS7 167 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR51D1Q8NGF3 324 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 ELMOD3Q96FG2 381 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 CPNE5Q9HCH3 593 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 MYEF2Q9P2K5 600 aaKnown RBP14.12□□□□□ -0.15
LMX1B-201ENST00000355497 CLN5O75503 358 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 CCL5P13501 91 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 ERVK-25P63136 954 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 TCEAL1Q15170 157 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 VASH1Q7L8A9 365 aaPredicted RBP14.12□□□□□ -0.15
LMX1B-201ENST00000355497 UMODL1-AS1Q8N2C9 162 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 ANKK1Q8NFD2 765 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR4K5Q8NGD3 323 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR4D6Q8NGJ1 314 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR2T35Q8NGX2 323 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 OR14L1PQ8NHC6 308 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 NPLOC4Q8TAT6 608 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 DDX1Q92499 740 aaKnown RBP14.12□□□□□ -0.15
LMX1B-201ENST00000355497 PEX11GQ96HA9 241 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 FTSJ1Q9UET6 329 aa14.12□□□□□ -0.15
LMX1B-201ENST00000355497 WDPCPO95876 746 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RETP07949 1114 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RAB3AP20336 220 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 SHC2P98077 582 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RING1Q06587 406 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 NPY5RQ15761 445 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 NDNFQ8TB73 568 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 SAMD8Q96LT4 415 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ALG8Q9BVK2 526 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 SIX4Q9UIU6 781 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 STMND1H3BQB6 276 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 PRAF2O60831 178 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 MITFO75030 526 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-201ENST00000355497 AKAIN1P0CW23 69 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 PNMTP11086 282 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 HSD17B1P14061 328 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 EVI2BP34910 448 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 FGFBP1Q14512 234 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 NIPAL3Q6P499 406 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 PRR18Q8N4B5 295 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ST6GALNAC5Q9BVH7 336 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 GCM1Q9NP62 436 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 NCDNQ9UBB6 729 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 A0A1W2PQU0 124 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 CD79BP40259 229 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 C1orf61Q13536 156 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 FCRLBQ6BAA4 426 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 SERINC5Q86VE9 423 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 OR9A4Q8NGU2 314 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 IGSF8Q969P0 613 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 NMNAT1Q9HAN9 279 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-201ENST00000355497 GJD2Q9UKL4 321 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RARRES3Q9UL19 164 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 SLC7A7Q9UM01 511 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF705GA8MUZ8 300 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RTCAO00442 366 aaKnown RBP14.11□□□□□ -0.15
LMX1B-201ENST00000355497 RAB3DO95716 219 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 CDK1P06493 297 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 WNT4P56705 351 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 LSAMPQ13449 338 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF704Q6ZNC4 412 aaPredicted RBP14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ARMC1Q9NVT9 282 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 ATG4BQ9Y4P1 393 aa14.11□□□□□ -0.15
LMX1B-201ENST00000355497 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 CD300LBA8K4G0 201 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TNFSF12O43508 249 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RFPL3O75679 317 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 CX3CR1P49238 355 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 GATMP50440 423 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 SGSHP51688 502 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RPS15P62841 145 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 FGL2Q14314 439 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 FAM69AQ5T7M9 428 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 PAPD5Q8NDF8 572 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 L3HYPDHQ96EM0 354 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 PELI2Q9HAT8 420 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 APOBEC3BQ9UH17 382 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 MROH1Q8NDA8 1641 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 IGLON5A6NGN9 336 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 UPK1BO75841 260 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ARHGEF15O94989 841 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 SERPINE2P07093 398 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RHOP08100 348 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 CRABP1P29762 137 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 PRKAR1BP31321 381 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 GRIN2CQ14957 1233 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 OR5D16Q8NGK9 328 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 GPR174Q9BXC1 333 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 PLEKHJ1Q9NW61 149 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 NDUFB2O95178 105 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms