RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LCATP04180 440 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CAPN3P20807 821 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 PRKXP51817 358 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 CDK3Q00526 305 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 LCTLQ6UWM7 567 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 TREX2Q9BQ50 279 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SLC46A2Q9BY10 475 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 EIF3FO00303 357 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 RAB3BP20337 219 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 SNTB2Q13425 540 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 METTL2BQ6P1Q9 378 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 BAIAP2L2Q6UXY1 529 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
SCN8A-202ENST00000355133 PRSS21Q9Y6M0 314 aa12.5□□□□□ -0.41
SCN8A-202ENST00000355133 MBLAC1A4D2B0 266 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 H3BUI4 141 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 OPN1LWP04000 364 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ARG2P78540 354 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 LYSMD4Q5XG99 296 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 LCN8Q6JVE9 175 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 MTFR2Q6P444 385 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ASRGL1Q7L266 308 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PIANPQ8IYJ0 282 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 SCML4Q8N228 414 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 CDRT4Q8N9R6 151 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 SYT14Q8NB59 555 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 OR51B6Q9H340 312 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ENTPD2Q9Y5L3 495 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 GABBR2O75899 941 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 OSMP13725 252 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 WDR53Q7Z5U6 358 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 CBARPQ8N350 705 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ZMYND19Q96E35 227 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 FAM71F1Q96KD3 344 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ABCG5Q9H222 651 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 YARS2Q9Y2Z4 477 aaKnown RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 SIGLEC1Q9BZZ2 1709 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 C7P10643 843 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PNMTP11086 282 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 TIMP2P16035 220 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 NKX3-2P78367 333 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 MICAQ29983 383 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 TM9SF4Q92544 642 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 KLHL15Q96M94 604 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 RIMS3Q9UJD0 308 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 F5H5K5 113 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 DDCP20711 480 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 XCR1P46094 333 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF181Q2M3W8 571 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 TP53I3Q53FA7 332 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF765Q7L2R6 523 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 HORMAD2Q8N7B1 307 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 MYLIPQ8WY64 445 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 SMIM14Q96QK8 99 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 GSTO2Q9H4Y5 243 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 EBF1Q9UH73 591 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 B3GALT1Q9Y5Z6 326 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 ANTXRLA6NF34 631 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 NDUFB2O95178 105 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PRLP01236 227 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 HSD17B1P14061 328 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 IVDP26440 423 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 CTSCP53634 463 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 FGL2Q14314 439 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 PPA1Q15181 289 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 NTRK2Q16620 822 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 COQ5Q5HYK3 327 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
SCN8A-202ENST00000355133 KLHL9Q9P2J3 617 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 CA5BQ9Y2D0 317 aa12.49□□□□□ -0.41
SCN8A-202ENST00000355133 LILRB3O75022 631 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 PVRP15151 417 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 HLCSP50747 726 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 AKR1C2P52895 323 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 MFSD13AQ14CX5 517 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 OR7A5Q15622 319 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 ACOT4Q8N9L9 421 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 GPR150Q8NGU9 434 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 CDS1Q92903 461 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 SYNPO2LQ9H987 977 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms